RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 HSPA1BP0DMV9 641 aaKnown RBP23.8■■□□□ 1.4
C4orf48-202ENST00000409860 TAL1P17542 331 aaPredicted RBP23.8■■□□□ 1.4
C4orf48-202ENST00000409860 LACTBP83111 547 aaPredicted RBP23.8■■□□□ 1.4
C4orf48-202ENST00000409860 CUL4AQ13619 759 aa23.8■■□□□ 1.4
C4orf48-202ENST00000409860 DDX11Q96FC9 970 aa23.8■■□□□ 1.4
C4orf48-202ENST00000409860 ACAD9Q9H845 621 aa23.8■■□□□ 1.4
C4orf48-202ENST00000409860 EFCC1Q9HA90 598 aa23.8■■□□□ 1.4
C4orf48-202ENST00000409860 BAZ2BQ9UIF8 2168 aaKnown RBP23.79■■□□□ 1.4
C4orf48-202ENST00000409860 FCGRTP55899 365 aa23.79■■□□□ 1.4
C4orf48-202ENST00000409860 PKN1Q16512 942 aa23.79■■□□□ 1.4
C4orf48-202ENST00000409860 WWC2Q6AWC2 1192 aa23.79■■□□□ 1.4
C4orf48-202ENST00000409860 SMARCC2Q8TAQ2 1214 aa23.79■■□□□ 1.4
C4orf48-202ENST00000409860 GPKOWQ92917 476 aaPredicted RBP eCLIP23.79■■□□□ 1.4
C4orf48-202ENST00000409860 COA7Q96BR5 231 aa23.79■■□□□ 1.4
C4orf48-202ENST00000409860 PPP1R18Q6NYC8 613 aa23.78■■□□□ 1.4
C4orf48-202ENST00000409860 CCDC12Q8WUD4 166 aaPredicted RBP23.78■■□□□ 1.4
C4orf48-202ENST00000409860 ZNF296Q8WUU4 475 aaPredicted RBP23.78■■□□□ 1.4
C4orf48-202ENST00000409860 ERO1AQ96HE7 468 aa23.78■■□□□ 1.4
C4orf48-202ENST00000409860 BARHL2Q9NY43 387 aa23.78■■□□□ 1.4
C4orf48-202ENST00000409860 IVNS1ABPQ9Y6Y0 642 aa23.78■■□□□ 1.4
C4orf48-202ENST00000409860 COL11A1P12107 1806 aaPredicted RBP23.77■■□□□ 1.4
C4orf48-202ENST00000409860 STXBP3O00186 592 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 ANP32AP39687 249 aaKnown RBP23.77■■□□□ 1.4
C4orf48-202ENST00000409860 NAPAP54920 295 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 GPR142Q7Z601 462 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 PLEKHH3Q7Z736 793 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 MCF2L2Q86YR7 1114 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 FAM184AQ8NB25 1140 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 SMC3Q9UQE7 1217 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 KIF3AQ9Y496 699 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 CEP350Q5VT06 3117 aa23.77■■□□□ 1.4
C4orf48-202ENST00000409860 TNPO2O14787 897 aaKnown RBP23.76■■□□□ 1.39
C4orf48-202ENST00000409860 FOXN1O15353 648 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 DTNBO60941 627 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 ECM2O94769 699 aaPredicted RBP23.76■■□□□ 1.39
C4orf48-202ENST00000409860 HSP90AA1P07900 732 aaKnown RBP23.76■■□□□ 1.39
C4orf48-202ENST00000409860 FDPSP14324 419 aaKnown RBP23.76■■□□□ 1.39
C4orf48-202ENST00000409860 XBP1P17861 261 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 PSMC4P43686 418 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 CTCFP49711 727 aaPredicted RBP23.76■■□□□ 1.39
C4orf48-202ENST00000409860 ARHGEF6Q15052 776 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 MUM1L1Q5H9M0 696 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.76■■□□□ 1.39
C4orf48-202ENST00000409860 CCDC148Q8NFR7 591 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 CLEC4DQ8WXI8 215 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 INTS4Q96HW7 963 aaKnown RBP23.76■■□□□ 1.39
C4orf48-202ENST00000409860 MMP19Q99542 508 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 ALG1Q9BT22 464 aa23.76■■□□□ 1.39
C4orf48-202ENST00000409860 NFIBO00712 420 aa23.75■■□□□ 1.39
C4orf48-202ENST00000409860 STRNO43815 780 aa23.75■■□□□ 1.39
C4orf48-202ENST00000409860 HSPA8P11142 646 aaKnown RBP23.75■■□□□ 1.39
C4orf48-202ENST00000409860 FCER1AP12319 257 aa23.75■■□□□ 1.39
C4orf48-202ENST00000409860 KCTD2Q14681 263 aa23.75■■□□□ 1.39
C4orf48-202ENST00000409860 CD99L2Q8TCZ2 262 aa23.75■■□□□ 1.39
C4orf48-202ENST00000409860 SH3GLB2Q9NR46 395 aa23.75■■□□□ 1.39
C4orf48-202ENST00000409860 TSHZ2Q9NRE2 1034 aa23.75■■□□□ 1.39
C4orf48-202ENST00000409860 NSMFQ6X4W1 530 aa23.74■■□□□ 1.39
C4orf48-202ENST00000409860 ABRAQ8N0Z2 381 aa23.74■■□□□ 1.39
C4orf48-202ENST00000409860 FAM177A1Q8N128 213 aaPredicted RBP23.74■■□□□ 1.39
C4orf48-202ENST00000409860 ANKRD35Q8N283 1001 aa23.74■■□□□ 1.39
C4orf48-202ENST00000409860 AIFM3Q96NN9 605 aa23.74■■□□□ 1.39
C4orf48-202ENST00000409860 ARHGAP39Q9C0H5 1083 aa23.74■■□□□ 1.39
C4orf48-202ENST00000409860 MAF1Q9H063 256 aa23.74■■□□□ 1.39
C4orf48-202ENST00000409860 VPS54Q9P1Q0 977 aa23.74■■□□□ 1.39
C4orf48-202ENST00000409860 PTPREP23469 700 aa23.73■■□□□ 1.39
C4orf48-202ENST00000409860 RGS22Q8NE09 1264 aa23.73■■□□□ 1.39
C4orf48-202ENST00000409860 TRIM47Q96LD4 638 aa23.73■■□□□ 1.39
C4orf48-202ENST00000409860 GLT8D2Q9H1C3 349 aa23.73■■□□□ 1.39
C4orf48-202ENST00000409860 A1CFQ9NQ94 594 aaKnown RBP23.73■■□□□ 1.39
C4orf48-202ENST00000409860 PFASO15067 1338 aa23.73■■□□□ 1.39
C4orf48-202ENST00000409860 ESYT2A0FGR8 921 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 SLC15A5A6NIM6 579 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 GNRH1P01148 92 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 GJB2P29033 226 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 CTGFP29279 349 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 ADCY7P51828 1080 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 TRIM29Q14134 588 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 GRB14Q14449 540 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 TYW1BQ6NUM6 668 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 RNF207Q6ZRF8 634 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 SAMD3Q8N6K7 520 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 SOCS4Q8WXH5 440 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 CUL5Q93034 780 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 PSTPIP2Q9H939 334 aa23.72■■□□□ 1.39
C4orf48-202ENST00000409860 SMCO2A6NFE2 343 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 GCOM1H8Y6P7 765 aaPredicted RBP23.71■■□□□ 1.39
C4orf48-202ENST00000409860 CFBP00751 764 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 POLR2MP0CAP2 368 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 HOXD10P28358 340 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 NLRP5P59047 1200 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 TEX2Q8IWB9 1127 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 C6orf50Q9HD87 102 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 FOXD4L1Q9NU39 408 aa23.71■■□□□ 1.39
C4orf48-202ENST00000409860 OPLAHO14841 1288 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 ADORA2AP29274 412 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 GNA11P29992 359 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 MRPL12P52815 198 aaKnown RBP23.7■■□□□ 1.38
C4orf48-202ENST00000409860 BAATQ14032 418 aaPredicted RBP23.7■■□□□ 1.38
C4orf48-202ENST00000409860 C8orf76Q96K31 380 aa23.7■■□□□ 1.38
C4orf48-202ENST00000409860 NUDT12Q9BQG2 462 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms