RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 HSPA1BP0DMV9 641 aaKnown RBP19.19■□□□□ 0.66
SUMO1-208ENST00000409627 HMGN5P82970 282 aaKnown RBP19.19■□□□□ 0.66
SUMO1-208ENST00000409627 CCAR1Q8IX12 1150 aaKnown RBP19.19■□□□□ 0.66
SUMO1-208ENST00000409627 TRERF1Q96PN7 1200 aa19.19■□□□□ 0.66
SUMO1-208ENST00000409627 EFCC1Q9HA90 598 aa19.19■□□□□ 0.66
SUMO1-208ENST00000409627 RNF146Q9NTX7 359 aa19.19■□□□□ 0.66
SUMO1-208ENST00000409627 ORC3Q9UBD5 711 aaPredicted RBP19.19■□□□□ 0.66
SUMO1-208ENST00000409627 MRPL11Q9Y3B7 192 aaKnown RBP19.19■□□□□ 0.66
SUMO1-208ENST00000409627 ZNFX1Q9P2E3 1918 aaKnown RBP19.18■□□□□ 0.66
SUMO1-208ENST00000409627 FDPSP14324 419 aaKnown RBP19.18■□□□□ 0.66
SUMO1-208ENST00000409627 TAL1P17542 331 aaPredicted RBP19.18■□□□□ 0.66
SUMO1-208ENST00000409627 SLC4A3P48751 1232 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 KIF22Q14807 665 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 WWC2Q6AWC2 1192 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 PPP1R18Q6NYC8 613 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 ZNF296Q8WUU4 475 aaPredicted RBP19.18■□□□□ 0.66
SUMO1-208ENST00000409627 WASF1Q92558 559 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 GPKOWQ92917 476 aaPredicted RBP eCLIP19.18■□□□□ 0.66
SUMO1-208ENST00000409627 COA7Q96BR5 231 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 ACAD9Q9H845 621 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 HOMER2Q9NSB8 354 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 BARHL2Q9NY43 387 aa19.18■□□□□ 0.66
SUMO1-208ENST00000409627 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.18■□□□□ 0.66
SUMO1-208ENST00000409627 FOXN1O15353 648 aa19.17■□□□□ 0.66
SUMO1-208ENST00000409627 FCGRTP55899 365 aa19.17■□□□□ 0.66
SUMO1-208ENST00000409627 GPR142Q7Z601 462 aa19.17■□□□□ 0.66
SUMO1-208ENST00000409627 CLEC4DQ8WXI8 215 aa19.17■□□□□ 0.66
SUMO1-208ENST00000409627 ERO1AQ96HE7 468 aa19.17■□□□□ 0.66
SUMO1-208ENST00000409627 MAF1Q9H063 256 aa19.17■□□□□ 0.66
SUMO1-208ENST00000409627 STXBP3O00186 592 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 HSPA8P11142 646 aaKnown RBP19.16■□□□□ 0.66
SUMO1-208ENST00000409627 CTGFP29279 349 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 MUM1L1Q5H9M0 696 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 WDR78Q5VTH9 848 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 PLEKHH3Q7Z736 793 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 ABRAQ8N0Z2 381 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
SUMO1-208ENST00000409627 DDX11Q96FC9 970 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 INTS4Q96HW7 963 aaKnown RBP19.16■□□□□ 0.66
SUMO1-208ENST00000409627 CWC22Q9HCG8 908 aaKnown RBP19.16■□□□□ 0.66
SUMO1-208ENST00000409627 SH3GLB2Q9NR46 395 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 DOCK3Q8IZD9 2030 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
SUMO1-208ENST00000409627 LCTP09848 1927 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 NFIBO00712 420 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 OPLAHO14841 1288 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 STRNO43815 780 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 DTNBO60941 627 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 PSMC4P43686 418 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 CTCFP49711 727 aaPredicted RBP19.15■□□□□ 0.66
SUMO1-208ENST00000409627 NAPAP54920 295 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 GHRHRQ02643 423 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 BECN1Q14457 450 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 TYW1BQ6NUM6 668 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 RGS22Q8NE09 1264 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 CD99L2Q8TCZ2 262 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 CCDC12Q8WUD4 166 aaPredicted RBP19.15■□□□□ 0.66
SUMO1-208ENST00000409627 ARHGAP39Q9C0H5 1083 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 IVNS1ABPQ9Y6Y0 642 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 CASP8AP2Q9UKL3 1982 aa19.15■□□□□ 0.66
SUMO1-208ENST00000409627 ESYT2A0FGR8 921 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 TNPO2O14787 897 aaKnown RBP19.14■□□□□ 0.65
SUMO1-208ENST00000409627 FCER1AP12319 257 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 PTPREP23469 700 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 GRB14Q14449 540 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 KCTD2Q14681 263 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 MCF2L2Q86YR7 1114 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 TEX2Q8IWB9 1127 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 SAMD3Q8N6K7 520 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 CCDC148Q8NFR7 591 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 TRIM47Q96LD4 638 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 AIFM3Q96NN9 605 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 MMP19Q99542 508 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 ALG1Q9BT22 464 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 A1CFQ9NQ94 594 aaKnown RBP19.14■□□□□ 0.65
SUMO1-208ENST00000409627 TSHZ2Q9NRE2 1034 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 SMC3Q9UQE7 1217 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 PFASO15067 1338 aa19.14■□□□□ 0.65
SUMO1-208ENST00000409627 SLC15A5A6NIM6 579 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 GNRH1P01148 92 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 XBP1P17861 261 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 CAP1Q01518 475 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 ARHGEF6Q15052 776 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 ANKRD35Q8N283 1001 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 SHISA4Q96DD7 197 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 MAP3K20Q9NYL2 800 aaKnown RBP19.13■□□□□ 0.65
SUMO1-208ENST00000409627 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 KIF3AQ9Y496 699 aa19.13■□□□□ 0.65
SUMO1-208ENST00000409627 ECM2O94769 699 aaPredicted RBP19.12■□□□□ 0.65
SUMO1-208ENST00000409627 GJB2P29033 226 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 MORN1Q5T089 497 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 NSMFQ6X4W1 530 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 RNF207Q6ZRF8 634 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 FAM184AQ8NB25 1140 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 SOCS4Q8WXH5 440 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 ZMYND12Q9H0C1 365 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 GLT8D2Q9H1C3 349 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 CYP39A1Q9NYL5 469 aa19.12■□□□□ 0.65
SUMO1-208ENST00000409627 PCNTO95613 3336 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms