RNA–Protein interactions for RNA: ENST00000409493.3

INO80B-202, Transcript of INO80 complex subunit B, humanhuman

TSL 5

Gene INO80B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-202ENST00000409493 ERVK-9P63128 1117 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 ERVK-24P63145 666 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 KRT85P78386 507 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 ZNF543Q08ER8 600 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L24Q0WX57 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 TROAPQ12815 778 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 PKP1Q13835 747 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 KLHL40Q2TBA0 621 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 KCTD1Q719H9 257 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 TRIM22Q8IYM9 498 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 SOCS4Q8WXH5 440 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
INO80B-202ENST00000409493 PAGR1Q9BTK6 254 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.72□□□□□ -0.21
INO80B-202ENST00000409493 RBM28Q9NW13 759 aaKnown RBP13.72□□□□□ -0.21
INO80B-202ENST00000409493 FRMPD3Q5JV73 1810 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 PARP1P09874 1014 aaKnown RBP13.71□□□□□ -0.21
INO80B-202ENST00000409493 GOLGA8HP0CJ92 632 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 IKQ13123 557 aaPredicted RBP13.71□□□□□ -0.21
INO80B-202ENST00000409493 GRM4Q14833 912 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 Q3C1V9 767 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 ASPRV1Q53RT3 343 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 CATSPERGQ6ZRH7 1159 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 TRIB2Q92519 343 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 DEFB118Q96PH6 123 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 SCAND2PQ9GZW5 306 aaPredicted RBP13.71□□□□□ -0.21
INO80B-202ENST00000409493 CRISPLD2Q9H0B8 497 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 PORCNQ9H237 461 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 GPCPD1Q9NPB8 672 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 CFAP45Q9UL16 551 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 RABGAP1Q9Y3P9 1069 aa13.71□□□□□ -0.21
INO80B-202ENST00000409493 ZNF236Q9UL36 1845 aa13.71□□□□□ -0.22
INO80B-202ENST00000409493 TMEM232C9JQI7 657 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 CNMDO75829 334 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 FLOT1O75955 427 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 XRCC5P13010 732 aaKnown RBP13.7□□□□□ -0.22
INO80B-202ENST00000409493 STAT2P52630 851 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
INO80B-202ENST00000409493 TRIM29Q14134 588 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 GSE1Q14687 1217 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
INO80B-202ENST00000409493 GPATCH4Q5T3I0 446 aaKnown RBP13.7□□□□□ -0.22
INO80B-202ENST00000409493 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 GPR142Q7Z601 462 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 STAG2Q8N3U4 1231 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 CTCFLQ8NI51 663 aaPredicted RBP13.7□□□□□ -0.22
INO80B-202ENST00000409493 NUDT12Q9BQG2 462 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
INO80B-202ENST00000409493 MAD2L2Q9UI95 211 aa13.7□□□□□ -0.22
INO80B-202ENST00000409493 DDX49Q9Y6V7 483 aaKnown RBP13.7□□□□□ -0.22
INO80B-202ENST00000409493 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
INO80B-202ENST00000409493 H0YGN5 161 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 XBP1P17861 261 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 CYP2B6P20813 491 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 KIF5BP33176 963 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 SLC16A2P36021 539 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 TRIM32Q13049 653 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 RTN1Q16799 776 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 PLEKHH3Q7Z736 793 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 USP6NLQ92738 828 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 C8orf76Q96K31 380 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 ZNF396Q96N95 335 aaPredicted RBP13.69□□□□□ -0.22
INO80B-202ENST00000409493 MAP3K14Q99558 947 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
INO80B-202ENST00000409493 ORC3Q9UBD5 711 aaPredicted RBP13.69□□□□□ -0.22
INO80B-202ENST00000409493 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 JAK2O60674 1132 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 TFRCP02786 760 aaKnown RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 IFNAR1P17181 557 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 RGS2P41220 211 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 CCNA1P78396 465 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 SSRP1Q08945 709 aaKnown RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 MORN1Q5T089 497 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 CCAR1Q8IX12 1150 aaKnown RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 TRMT44Q8IYL2 757 aaKnown RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 FANCBQ8NB91 859 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 DPF3Q92784 378 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 KIFC2Q96AC6 838 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 APBA2Q99767 749 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 SLF1Q9BQI6 1058 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 UBA5Q9GZZ9 404 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 FEM1BQ9UK73 627 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
INO80B-202ENST00000409493 COL11A1P12107 1806 aaPredicted RBP13.68□□□□□ -0.22
INO80B-202ENST00000409493 ELP1O95163 1332 aa13.67□□□□□ -0.22
INO80B-202ENST00000409493 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
INO80B-202ENST00000409493 PRPF40AO75400 957 aaKnown RBP13.67□□□□□ -0.22
INO80B-202ENST00000409493 CTDNEP1O95476 244 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms