RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CCDC144CPQ8IYA2 1237 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 SAMD3Q8N6K7 520 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 GPHNQ9NQX3 736 aaPredicted RBP15.05■□□□□ -0
SNORD88B-201ENST00000408454 IL17RBQ9NRM6 502 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 TMEM39AQ9NV64 488 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 POLR3EQ9NVU0 708 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 MTMR7Q9Y216 660 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 RIPK3Q9Y572 518 aa15.05■□□□□ -0
SNORD88B-201ENST00000408454 PLXNA1Q9UIW2 1896 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 ADAMTS4O75173 837 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 PDHBP11177 359 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 CPT1AP50416 773 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 ZNF543Q08ER8 600 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 PNMA1Q8ND90 353 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 RGS22Q8NE09 1264 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 EXOC6Q8TAG9 804 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 FERMT2Q96AC1 680 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 UPF3AQ9H1J1 476 aaKnown RBP15.04■□□□□ -0
SNORD88B-201ENST00000408454 CYP39A1Q9NYL5 469 aa15.04■□□□□ -0
SNORD88B-201ENST00000408454 CEP290O15078 2479 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 ABCB11O95342 1321 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 TMEM265A0A087WTH1 108 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 PTPDC1A2A3K4 754 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 DHX16O60231 1041 aaKnown RBP15.03■□□□□ -0
SNORD88B-201ENST00000408454 SNAI1O95863 264 aaPredicted RBP15.03■□□□□ -0
SNORD88B-201ENST00000408454 SUPT20HL2P0C7V6 817 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 HAND2P61296 217 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 NKX3-2P78367 333 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 TLE2Q04725 743 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 PDE4DQ08499 809 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 RNF207Q6ZRF8 634 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 KIAA1211Q6ZU35 1233 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 TMEM199Q8N511 208 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 KLHDC9Q8NEP7 349 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 AGBL1Q96MI9 1066 aa15.03■□□□□ -0
SNORD88B-201ENST00000408454 ZSCAN10Q96SZ4 725 aaPredicted RBP15.03■□□□□ -0
SNORD88B-201ENST00000408454 MAP3K20Q9NYL2 800 aaKnown RBP15.03■□□□□ -0
SNORD88B-201ENST00000408454 KIAA0355O15063 1070 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 PQBP1O60828 265 aaKnown RBP15.02■□□□□ -0
SNORD88B-201ENST00000408454 PARP1P09874 1014 aaKnown RBP15.02■□□□□ -0
SNORD88B-201ENST00000408454 SNHG28P0DPA3 235 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 FPGSQ05932 587 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 PPIGQ13427 754 aaKnown RBP eCLIP15.02■□□□□ -0
SNORD88B-201ENST00000408454 KCNA10Q16322 511 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 IFIT1BQ5T764 474 aaKnown RBP15.02■□□□□ -0
SNORD88B-201ENST00000408454 ZNF697Q5TEC3 545 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 TLK2Q86UE8 772 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 ZNF589Q86UQ0 364 aaPredicted RBP15.02■□□□□ -0
SNORD88B-201ENST00000408454 SCFD2Q8WU76 684 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 ANKS1AQ92625 1134 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 GPCPD1Q9NPB8 672 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 PDLIM7Q9NR12 457 aa15.02■□□□□ -0
SNORD88B-201ENST00000408454 MRPL11Q9Y3B7 192 aaKnown RBP15.02■□□□□ -0
SNORD88B-201ENST00000408454 ZNF536O15090 1300 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 FOXP2O15409 715 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 NMT2O60551 498 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 KDM4AO75164 1064 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 ASGR1P07306 291 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 FSCN1Q16658 493 aaKnown RBP15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 DEFB123Q8N688 67 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 BRCA2P51587 3418 aa15.01□□□□□ -0.01
SNORD88B-201ENST00000408454 ZNFX1Q9P2E3 1918 aaKnown RBP15□□□□□ -0.01
SNORD88B-201ENST00000408454 ARVCFO00192 962 aa15□□□□□ -0.01
SNORD88B-201ENST00000408454 SMAD3P84022 425 aaKnown RBP15□□□□□ -0.01
SNORD88B-201ENST00000408454 PPP2R5BQ15173 497 aa15□□□□□ -0.01
SNORD88B-201ENST00000408454 TTC22Q5TAA0 569 aa15□□□□□ -0.01
SNORD88B-201ENST00000408454 MORC4Q8TE76 937 aa15□□□□□ -0.01
SNORD88B-201ENST00000408454 IWS1Q96ST2 819 aa15□□□□□ -0.01
SNORD88B-201ENST00000408454 MTA3Q9BTC8 594 aa15□□□□□ -0.01
SNORD88B-201ENST00000408454 ALPK3Q96L96 1907 aa15□□□□□ -0.01
SNORD88B-201ENST00000408454 TNKSO95271 1327 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 FRMPD2Q68DX3 1309 aaPredicted RBP14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 IGHDP01880 384 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 TAL1P17542 331 aaPredicted RBP14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 ALDH5A1P51649 535 aaPredicted RBP14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 CNTN2Q02246 1040 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 TTLL4Q14679 1199 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 DUSP28Q4G0W2 176 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 KCNV1Q6PIU1 500 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 TMTC2Q8N394 836 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 NSUN6Q8TEA1 469 aaKnown RBP14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 RNPC3Q96LT9 517 aaKnown RBP14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 STXBP5LQ9Y2K9 1186 aa14.99□□□□□ -0.01
SNORD88B-201ENST00000408454 TRIOBPQ9H2D6 2365 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 TIMP1P01033 207 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 PFKMP08237 780 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 CALML3P27482 149 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 SLC16A2P36021 539 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 BAATQ14032 418 aaPredicted RBP14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 FBXO11Q86XK2 927 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 TBC1D10CQ8IV04 446 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 RPUSD2Q8IZ73 545 aaKnown RBP14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 CCDC155Q8N6L0 562 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 NCOA7Q8NI08 942 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 BADQ92934 168 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 AMNQ9BXJ7 453 aa14.98□□□□□ -0.01
SNORD88B-201ENST00000408454 LAMA4Q16363 1823 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms