RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 CCDC103Q8IW40 242 aa9.3□□□□□ -0.92
PTPN12-202ENST00000407343 LINC01599Q8WXQ3 324 aa9.3□□□□□ -0.92
PTPN12-202ENST00000407343 DNAJC25-GNG10A0A024R161 153 aa9.29□□□□□ -0.92
PTPN12-202ENST00000407343 CPP00450 1065 aa9.29□□□□□ -0.92
PTPN12-202ENST00000407343 FUT4P22083 530 aa9.29□□□□□ -0.92
PTPN12-202ENST00000407343 ZP2Q05996 745 aa9.29□□□□□ -0.92
PTPN12-202ENST00000407343 CBX2Q14781 532 aaPredicted RBP9.29□□□□□ -0.92
PTPN12-202ENST00000407343 RALGPS1Q5JS13 557 aa9.29□□□□□ -0.92
PTPN12-202ENST00000407343 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
PTPN12-202ENST00000407343 KCTD13Q8WZ19 329 aa9.29□□□□□ -0.92
PTPN12-202ENST00000407343 BLACEA4D250 179 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 ZGLP1P0C6A0 271 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 ECI1P42126 302 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 ACBD5Q5T8D3 534 aaPredicted RBP9.28□□□□□ -0.92
PTPN12-202ENST00000407343 EEF1DP3Q658K8 133 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 MBLAC2Q68D91 279 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 ZNF662Q6ZS27 426 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 WAPLQ7Z5K2 1190 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 PTCHD1Q96NR3 888 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 CDC6Q99741 560 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 CDADC1Q9BWV3 514 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 ADAMTS10Q9H324 1103 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 NCOA5Q9HCD5 579 aaKnown RBP9.28□□□□□ -0.92
PTPN12-202ENST00000407343 PRDM7Q9NQW5 492 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 C19orf73Q9NVV2 129 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 ADAMTS6Q9UKP5 1117 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 NPFFR2Q9Y5X5 522 aa9.28□□□□□ -0.92
PTPN12-202ENST00000407343 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 ASMTLO95671 621 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 PLS3P13797 630 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 RPL10P27635 214 aaKnown RBP9.27□□□□□ -0.93
PTPN12-202ENST00000407343 SUMO1P63165 101 aaKnown RBP9.27□□□□□ -0.93
PTPN12-202ENST00000407343 LRP8Q14114 963 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 TRIM61Q5EBN2 209 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 ZMYM1Q5SVZ6 1142 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 FLCNQ8NFG4 579 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 FCRL2Q96LA5 508 aaPredicted RBP9.27□□□□□ -0.93
PTPN12-202ENST00000407343 SP110Q9HB58 689 aa9.27□□□□□ -0.93
PTPN12-202ENST00000407343 CWC22Q9HCG8 908 aaKnown RBP9.27□□□□□ -0.93
PTPN12-202ENST00000407343 ASXL2Q76L83 1435 aa9.26□□□□□ -0.93
PTPN12-202ENST00000407343 HYAL3O43820 417 aaPredicted RBP9.26□□□□□ -0.93
PTPN12-202ENST00000407343 KCNJ6P48051 423 aa9.26□□□□□ -0.93
PTPN12-202ENST00000407343 MAP6Q96JE9 813 aa9.26□□□□□ -0.93
PTPN12-202ENST00000407343 HHIPL1Q96JK4 782 aa9.26□□□□□ -0.93
PTPN12-202ENST00000407343 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
PTPN12-202ENST00000407343 ALPK1Q96QP1 1244 aa9.26□□□□□ -0.93
PTPN12-202ENST00000407343 CLEC1BQ9P126 229 aa9.26□□□□□ -0.93
PTPN12-202ENST00000407343 SSU72P8A0A1W2PR75 194 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 NOTOA8MTQ0 251 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 KCNQ2O43526 872 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 EFEMP2O95967 443 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 ENDOUP21128 410 aaKnown RBP9.25□□□□□ -0.93
PTPN12-202ENST00000407343 SEPHS1P49903 392 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 SYNPOQ8N3V7 929 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 GSTCDQ8NEC7 633 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 MMP19Q99542 508 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 SLAMF8Q9P0V8 285 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 CD2APQ9Y5K6 639 aa9.25□□□□□ -0.93
PTPN12-202ENST00000407343 FADS2P1A8MWK0 482 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 PLD2O14939 933 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 INF2Q27J81 1249 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 SLC23A3Q6PIS1 610 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 PPIL6Q8IXY8 311 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 SLC7A14Q8TBB6 771 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 FEZ1Q99689 392 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 MRPL4Q9BYD3 311 aaKnown RBP9.24□□□□□ -0.93
PTPN12-202ENST00000407343 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
PTPN12-202ENST00000407343 PCMTD2Q9NV79 361 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 TMEM59LQ9UK28 342 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
PTPN12-202ENST00000407343 RAPGEF3O95398 923 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 LCP1P13796 627 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 TCEA2Q15560 299 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 DALRD3Q5D0E6 543 aaKnown RBP9.23□□□□□ -0.93
PTPN12-202ENST00000407343 E4F1Q66K89 784 aaPredicted RBP9.23□□□□□ -0.93
PTPN12-202ENST00000407343 STYK1Q6J9G0 422 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 KCNT2Q6UVM3 1135 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 SLCO6A1Q86UG4 719 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 KSR1Q8IVT5 923 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 SLC52A2Q9HAB3 445 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 TRIM39Q9HCM9 518 aa9.23□□□□□ -0.93
PTPN12-202ENST00000407343 ANGEL1Q9UNK9 670 aaKnown RBP9.23□□□□□ -0.93
PTPN12-202ENST00000407343 MSCO60682 206 aa9.22□□□□□ -0.93
PTPN12-202ENST00000407343 RFPL3O75679 317 aa9.22□□□□□ -0.93
PTPN12-202ENST00000407343 WNT11O96014 354 aa9.22□□□□□ -0.93
PTPN12-202ENST00000407343 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
PTPN12-202ENST00000407343 FNDC3BQ53EP0 1204 aaKnown RBP9.22□□□□□ -0.93
PTPN12-202ENST00000407343 CYP2R1Q6VVX0 501 aa9.22□□□□□ -0.93
PTPN12-202ENST00000407343 USP53Q70EK8 1073 aa9.22□□□□□ -0.93
PTPN12-202ENST00000407343 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.21□□□□□ -0.94
PTPN12-202ENST00000407343 MEFVO15553 781 aaPredicted RBP9.21□□□□□ -0.94
PTPN12-202ENST00000407343 PAMP19021 973 aa9.21□□□□□ -0.94
PTPN12-202ENST00000407343 PABPC4Q13310 644 aaKnown RBP eCLIP9.21□□□□□ -0.94
PTPN12-202ENST00000407343 CPNE8Q86YQ8 564 aa9.21□□□□□ -0.94
PTPN12-202ENST00000407343 RCBTB1Q8NDN9 531 aa9.21□□□□□ -0.94
PTPN12-202ENST00000407343 DCAF4Q8WV16 495 aa9.21□□□□□ -0.94
PTPN12-202ENST00000407343 SCLYQ96I15 445 aa9.21□□□□□ -0.94
PTPN12-202ENST00000407343 TNFRSF10DQ9UBN6 386 aa9.21□□□□□ -0.94
PTPN12-202ENST00000407343 FBXL7Q9UJT9 491 aa9.21□□□□□ -0.94
PTPN12-202ENST00000407343 TRAF6Q9Y4K3 522 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms