RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
ITSN2-203ENST00000406921 USP17L5A8MUK1 530 aa16.55■□□□□ 0.24
ITSN2-203ENST00000406921 PPP2R3AQ06190 1150 aa16.55■□□□□ 0.24
ITSN2-203ENST00000406921 ADAM9Q13443 819 aa16.55■□□□□ 0.24
ITSN2-203ENST00000406921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.55■□□□□ 0.24
ITSN2-203ENST00000406921 LSM14BQ9BX40 385 aaKnown RBP16.55■□□□□ 0.24
ITSN2-203ENST00000406921 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 GSG1L2A8MUP6 293 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 NUP58Q9BVL2 599 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 COL4A3BPQ9Y5P4 624 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 STK24Q9Y6E0 443 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 LIG4P49917 911 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 VAV2P52735 878 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 SYDE2Q5VT97 1194 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 DCUN1D2Q6PH85 259 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 DGKHQ86XP1 1220 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 OTUD6BQ8N6M0 293 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 ENAHQ8N8S7 591 aaPredicted RBP16.54■□□□□ 0.24
ITSN2-203ENST00000406921 CAMSAP1Q5T5Y3 1602 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 A0A1W2PQ27 194 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 A0A1W2PQ64 194 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 A0A1W2PQD8 194 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 Q3C1V9 767 aa16.54■□□□□ 0.24
ITSN2-203ENST00000406921 LARP4BQ92615 738 aaKnown RBP16.54■□□□□ 0.24
ITSN2-203ENST00000406921 POLGP54098 1239 aaPredicted RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 PPP1R14CQ8TAE6 165 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 NAPGQ99747 312 aaPredicted RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 ANKFY1Q9P2R3 1169 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 SCAF8Q9UPN6 1271 aaKnown RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 PRR5LQ6MZQ0 368 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 PRPF3O43395 683 aaKnown RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 CEP104O60308 925 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 APBB1IPQ7Z5R6 666 aaPredicted RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 OR8K1Q8NGG5 319 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 GOLGA8FQ08AF8 430 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 GOLGA8DPQ0D2H9 430 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 ARMCX5Q6P1M9 558 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 CDAN1Q8IWY9 1227 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 SECISBP2LQ93073 1101 aaKnown RBP16.53■□□□□ 0.24
ITSN2-203ENST00000406921 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
ITSN2-203ENST00000406921 IGSF3O75054 1194 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 SLC8A3P57103 927 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 RESTQ13127 1097 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 RNF34Q969K3 372 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 IFIH1Q9BYX4 1025 aaKnown RBP16.52■□□□□ 0.24
ITSN2-203ENST00000406921 SPC25Q9HBM1 224 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 U2AF2P26368 475 aaKnown RBP eCLIP16.52■□□□□ 0.24
ITSN2-203ENST00000406921 PPM1KQ8N3J5 372 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 NEXMIFQ5QGS0 1516 aa16.52■□□□□ 0.24
ITSN2-203ENST00000406921 USP17L15C9J2P7 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L11C9JVI0 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L18D6R9N7 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L22D6RA61 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L19D6RCP7 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L20D6RJB6 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 ASNSP08243 561 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 BCRP11274 1271 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 TNNC1P63316 161 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L24Q0WX57 530 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 SEL1L2Q5TEA6 688 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 USP17L6PQ6QN14 398 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 C11orf57Q6ZUT1 292 aaPredicted RBP16.52■□□□□ 0.23
ITSN2-203ENST00000406921 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 STAG1Q8WVM7 1258 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 NOX5Q96PH1 765 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 MYO3AQ8NEV4 1616 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 TUBB4AP04350 444 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 TRAPPC10P48553 1259 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 CALCOCO2Q13137 446 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 MRRFQ96E11 262 aaKnown RBP16.52■□□□□ 0.23
ITSN2-203ENST00000406921 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.23
ITSN2-203ENST00000406921 NRBP1Q9UHY1 535 aa16.52■□□□□ 0.23
ITSN2-203ENST00000406921 RIOK3O14730 519 aaKnown RBP16.51■□□□□ 0.23
ITSN2-203ENST00000406921 IMPACTQ9P2X3 320 aa16.51■□□□□ 0.23
ITSN2-203ENST00000406921 UBN2Q6ZU65 1347 aa16.51■□□□□ 0.23
ITSN2-203ENST00000406921 M0QZ92 97 aa16.51■□□□□ 0.23
ITSN2-203ENST00000406921 ATP2A1O14983 1001 aa16.51■□□□□ 0.23
ITSN2-203ENST00000406921 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
ITSN2-203ENST00000406921 POLR2FP61218 127 aaKnown RBP16.51■□□□□ 0.23
ITSN2-203ENST00000406921 IRX5P78411 483 aaPredicted RBP16.51■□□□□ 0.23
ITSN2-203ENST00000406921 SPATA1Q5VX52 437 aa16.51■□□□□ 0.23
ITSN2-203ENST00000406921 MCTP2Q6DN12 878 aa16.51■□□□□ 0.23
ITSN2-203ENST00000406921 KLHL7Q8IXQ5 586 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms