RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CASP2P42575 452 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 BRD3Q15059 726 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 IQCB1Q15051 598 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 ANKRD36BP1Q96IX9 119 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 ABCD1P33897 745 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 SMAP1Q8IYB5 467 aaPredicted RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 CCDC124Q96CT7 223 aaKnown RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 SMYD2Q9NRG4 433 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 ZMYM6O95789 1325 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 SPECC1L-ADORA2AF8WAN1 911 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 MX2P20592 715 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 SUGCTQ9HAC7 445 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 BFSP1Q12934 665 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 ADALQ6DHV7 355 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 DCLK2Q8N568 766 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 METTL14Q9HCE5 456 aaKnown RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 CPSF3Q9UKF6 684 aaKnown RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 ANGPTL3Q9Y5C1 460 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 GTF2IP78347 998 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 AOC3Q16853 763 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
SMCR8-201ENST00000406438 ALAS1P13196 640 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 VPS41P49754 854 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 SULF1Q8IWU6 871 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 SLC12A6Q9UHW9 1150 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 PDE6AP16499 860 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 GPR162Q16538 588 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
SMCR8-201ENST00000406438 HYOU1Q9Y4L1 999 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 NUB1Q9Y5A7 615 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 PCDHB4Q9Y5E5 795 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 NCAPG2Q86XI2 1143 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 PTPN22Q9Y2R2 807 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 ZAP70P43403 619 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 DRC3Q9H069 523 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 LUC7L3O95232 432 aaKnown RBP13.14□□□□□ -0.31
SMCR8-201ENST00000406438 NOSTRINQ8IVI9 506 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 PLEKHA4Q9H4M7 779 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 SEPT9Q9UHD8 586 aaPredicted RBP13.14□□□□□ -0.31
SMCR8-201ENST00000406438 ZNF233A6NK53 670 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
SMCR8-201ENST00000406438 SESN3P58005 492 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 NEK8Q86SG6 692 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 GPIHBP1Q8IV16 184 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 IFT122Q9HBG6 1241 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 OLA1Q9NTK5 396 aaKnown RBP13.14□□□□□ -0.31
SMCR8-201ENST00000406438 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
SMCR8-201ENST00000406438 OR52Z1P0C646 297 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 GABPB1Q06547 395 aaPredicted RBP13.13□□□□□ -0.31
SMCR8-201ENST00000406438 NLRP7Q8WX94 980 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 BPIFB4P59827 614 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 PTK2Q05397 1052 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 TFDP1Q14186 410 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 STAMQ92783 540 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 UBN1Q9NPG3 1134 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 ZNF148Q9UQR1 794 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 H7C0C1 242 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 ATP5OP48047 213 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 RYBPQ8N488 228 aaPredicted RBP13.13□□□□□ -0.31
SMCR8-201ENST00000406438 FAM81BQ96LP2 452 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
SMCR8-201ENST00000406438 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 BUB1O43683 1085 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 SORBS3O60504 671 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 XAB2Q9HCS7 855 aaKnown RBP13.13□□□□□ -0.31
SMCR8-201ENST00000406438 KAT6AQ92794 2004 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 SYNJ2BP-COX16A0A087WUM0 186 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 KRT10P13645 584 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 LMCD1Q9NZU5 365 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 COX16Q9P0S2 106 aa13.13□□□□□ -0.31
SMCR8-201ENST00000406438 LARSQ9P2J5 1176 aaKnown RBP13.13□□□□□ -0.31
SMCR8-201ENST00000406438 EVI5O60447 810 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 NSFP46459 744 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 ZNF445P59923 1031 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 XPO4Q9C0E2 1151 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 RPN1P04843 607 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 MYL7Q01449 175 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
SMCR8-201ENST00000406438 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
SMCR8-201ENST00000406438 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms