RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 NUTM2EB1AL46 878 aaPredicted RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 GOLGA8HP0CJ92 632 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 C8orf74Q6P047 294 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 TMTC2Q8N394 836 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 RNPC3Q96LT9 517 aaKnown RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 MYCBPQ99417 103 aaPredicted RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 RNF41Q9H4P4 317 aaPredicted RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 GRIN2DO15399 1336 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 SEMA3EO15041 775 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 TUBBP07437 444 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 GLI1P08151 1106 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 ATF3P18847 181 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 EVA1CP58658 441 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 LRRC41Q15345 812 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 NAALADL2Q58DX5 795 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
SMC1B-202ENST00000404354 STAG2Q8N3U4 1231 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 DNAJC7Q99615 494 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 NCAPGQ9BPX3 1015 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 TACC1O75410 805 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 MCM3P25205 808 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 FUT2Q10981 343 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 TROAPQ12815 778 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 TRIM14Q14142 442 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 HLTFQ14527 1009 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMC1B-202ENST00000404354 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 HEATR3Q7Z4Q2 680 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 KIRREL3Q8IZU9 778 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 OSBPL9Q96SU4 736 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 ARHGAP20Q9P2F6 1191 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 SNX12Q9UMY4 172 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 PCDHA13Q9Y5I0 950 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 ABCC12Q96J65 1359 aa10.65□□□□□ -0.7
SMC1B-202ENST00000404354 FRMD3A2A2Y4 597 aa10.65□□□□□ -0.71
SMC1B-202ENST00000404354 ARID4AP29374 1257 aaPredicted RBP10.65□□□□□ -0.71
SMC1B-202ENST00000404354 MAGEA1P43355 309 aa10.65□□□□□ -0.71
SMC1B-202ENST00000404354 TUBB4BP68371 445 aa10.65□□□□□ -0.71
SMC1B-202ENST00000404354 ALX1Q15699 326 aa10.65□□□□□ -0.71
SMC1B-202ENST00000404354 CEP57Q86XR8 500 aa10.65□□□□□ -0.71
SMC1B-202ENST00000404354 CCDC24Q8N4L8 307 aa10.65□□□□□ -0.71
SMC1B-202ENST00000404354 ZNF507Q8TCN5 953 aa10.65□□□□□ -0.71
SMC1B-202ENST00000404354 AENQ8WTP8 325 aaKnown RBP10.65□□□□□ -0.71
SMC1B-202ENST00000404354 CCDC194A0A1B0GVG4 234 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 PRPF3O43395 683 aaKnown RBP10.64□□□□□ -0.71
SMC1B-202ENST00000404354 MAP2K2P36507 400 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 DNM2P50570 870 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 CFAP58Q5T655 872 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 PIGBQ92521 554 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 KRT12Q99456 494 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 DUSP9Q99956 384 aaKnown RBP10.64□□□□□ -0.71
SMC1B-202ENST00000404354 DISC1Q9NRI5 854 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 ARHGAP23Q9P227 1491 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 TSPY2A6NKD2 308 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 SCG2P13521 617 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 FECHP22830 423 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 PAFAH1B1P43034 410 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 KIF11P52732 1056 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 LETM2Q2VYF4 491 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMC1B-202ENST00000404354 RMND1Q9NWS8 449 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 E7EVH7 732 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 USO1O60763 962 aaKnown RBP10.64□□□□□ -0.71
SMC1B-202ENST00000404354 STARD3NLO95772 234 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 DDX42Q86XP3 938 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMC1B-202ENST00000404354 TBC1D7Q9P0N9 293 aa10.64□□□□□ -0.71
SMC1B-202ENST00000404354 MAP3K15Q6ZN16 1313 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 PDE8AO60658 829 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 HEXIM1O94992 359 aaKnown RBP10.63□□□□□ -0.71
SMC1B-202ENST00000404354 TECP42680 631 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 SLC1A4P43007 532 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 VAV2P52735 878 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 HDLBPQ00341 1268 aaKnown RBP10.63□□□□□ -0.71
SMC1B-202ENST00000404354 HAUS3Q68CZ6 603 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 TMTC3Q6ZXV5 915 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 MTMR8Q96EF0 704 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 STIM2Q9P246 746 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 LRRC53A6NM62 1247 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 SRGNP10124 158 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 PLCG1P19174 1290 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 EHHADHQ08426 723 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 CEP85LQ5SZL2 805 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 TTI2Q6NXR4 508 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 CACNA2D4Q7Z3S7 1137 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
SMC1B-202ENST00000404354 EHBP1Q8NDI1 1231 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 GLIS3Q8NEA6 775 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 TARSL2A2RTX5 802 aaKnown RBP10.63□□□□□ -0.71
SMC1B-202ENST00000404354 OPA1O60313 960 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 TMOD1P28289 359 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 ZBED6P86452 979 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
SMC1B-202ENST00000404354 PDE6BP35913 854 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 E2F5Q15329 346 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 ODF2Q5BJF6 829 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 AMOTL1Q8IY63 956 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 NOC3LQ8WTT2 800 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms