RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 AGBL1Q96MI9 1066 aa11.24□□□□□ -0.61
NUP43-204ENST00000403890 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
NUP43-204ENST00000403890 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
NUP43-204ENST00000403890 PPP1R9AQ9ULJ8 1098 aa11.24□□□□□ -0.61
NUP43-204ENST00000403890 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.23□□□□□ -0.61
NUP43-204ENST00000403890 B4GALT4O60513 344 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 LPXNO60711 386 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 ACTN1P12814 892 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 ICA1Q05084 483 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 LEXMQ3ZCV2 418 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
NUP43-204ENST00000403890 NOL8Q76FK4 1167 aaKnown RBP11.23□□□□□ -0.61
NUP43-204ENST00000403890 MAGEB6Q8N7X4 407 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 SLC9A7Q96T83 725 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 TEX13BQ9BXU2 312 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 UBE2ZQ9H832 354 aaPredicted RBP11.23□□□□□ -0.61
NUP43-204ENST00000403890 GPR108Q9NPR9 543 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
NUP43-204ENST00000403890 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 GRIN2DO15399 1336 aa11.23□□□□□ -0.61
NUP43-204ENST00000403890 WDFY4Q6ZS81 3184 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 DCXO43602 365 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 ZEB2O60315 1214 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 ARHGEF15O94989 841 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 TNNI3KQ59H18 835 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 DEFB128Q7Z7B8 93 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 CLEC10AQ8IUN9 316 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 HERC6Q8IVU3 1022 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 API5Q9BZZ5 524 aaKnown RBP11.22□□□□□ -0.61
NUP43-204ENST00000403890 SWAP70Q9UH65 585 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 NOB1Q9ULX3 412 aaKnown RBP11.22□□□□□ -0.61
NUP43-204ENST00000403890 FPGT-TNNI3KV9GXZ4 949 aa11.22□□□□□ -0.61
NUP43-204ENST00000403890 SUPT20HL2P0C7V6 817 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 KCNA5P22460 613 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 FOXK2Q01167 660 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 TNFAIP2Q03169 654 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 FSCN1Q16658 493 aaKnown RBP11.21□□□□□ -0.61
NUP43-204ENST00000403890 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
NUP43-204ENST00000403890 ARMCX2Q7L311 632 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 HS6ST3Q8IZP7 471 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.21□□□□□ -0.61
NUP43-204ENST00000403890 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
NUP43-204ENST00000403890 AP5M1Q9H0R1 490 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
NUP43-204ENST00000403890 PTPRZ1P23471 2315 aaPredicted RBP11.2□□□□□ -0.62
NUP43-204ENST00000403890 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 ASTN1O14525 1302 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 AKR1B1P15121 316 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 PSMC6P62333 389 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 FAM83BQ5T0W9 1011 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 PTCRAQ6ISU1 281 aaPredicted RBP11.2□□□□□ -0.62
NUP43-204ENST00000403890 CCDC144CPQ8IYA2 1237 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 CCDC17Q96LX7 622 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 MFSD14AQ96MC6 490 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
NUP43-204ENST00000403890 KATNBL1Q9H079 304 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
NUP43-204ENST00000403890 GOPCQ9HD26 462 aa11.2□□□□□ -0.62
NUP43-204ENST00000403890 MYO5AQ9Y4I1 1855 aaKnown RBP11.19□□□□□ -0.62
NUP43-204ENST00000403890 COL11A1P12107 1806 aaPredicted RBP11.19□□□□□ -0.62
NUP43-204ENST00000403890 ZNF536O15090 1300 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 PNMA6EA0A0J9YXQ4 647 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.19□□□□□ -0.62
NUP43-204ENST00000403890 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 E9PSI1 815 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 DYNC1LI2O43237 492 aaPredicted RBP11.19□□□□□ -0.62
NUP43-204ENST00000403890 RAD21O60216 631 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 CYP2C9P11712 490 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 EEF2P13639 858 aaKnown RBP11.19□□□□□ -0.62
NUP43-204ENST00000403890 IL9P15248 144 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 RFC2P35250 354 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 PUS10Q3MIT2 529 aaKnown RBP11.19□□□□□ -0.62
NUP43-204ENST00000403890 HFE2Q6ZVN8 426 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 SPRED2Q7Z698 418 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 TLK2Q86UE8 772 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 CPXCR1Q8N123 301 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 ANKRD35Q8N283 1001 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 GDPD5Q8WTR4 605 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 FGD4Q96M96 766 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 PHOX2BQ99453 314 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 SLF1Q9BQI6 1058 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 FTOQ9C0B1 505 aaKnown RBP eCLIP11.19□□□□□ -0.62
NUP43-204ENST00000403890 KANSL2Q9H9L4 492 aa11.19□□□□□ -0.62
NUP43-204ENST00000403890 GNEQ9Y223 722 aaKnown RBP11.19□□□□□ -0.62
NUP43-204ENST00000403890 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
NUP43-204ENST00000403890 CYP2D6P10635 497 aa11.18□□□□□ -0.62
NUP43-204ENST00000403890 OS9Q13438 667 aaPredicted RBP11.18□□□□□ -0.62
NUP43-204ENST00000403890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.18□□□□□ -0.62
NUP43-204ENST00000403890 PRPF38AQ8NAV1 312 aaKnown RBP11.18□□□□□ -0.62
NUP43-204ENST00000403890 DYNLL2Q96FJ2 89 aa11.18□□□□□ -0.62
NUP43-204ENST00000403890 SUGCTQ9HAC7 445 aa11.18□□□□□ -0.62
NUP43-204ENST00000403890 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
NUP43-204ENST00000403890 FBXO40Q9UH90 709 aa11.18□□□□□ -0.62
NUP43-204ENST00000403890 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
NUP43-204ENST00000403890 ZFHX2Q9C0A1 2572 aaPredicted RBP11.18□□□□□ -0.62
NUP43-204ENST00000403890 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
NUP43-204ENST00000403890 TNKSO95271 1327 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms