RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 DDX58O95786 925 aaKnown RBP8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 GNA15P30679 374 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 MMP14P50281 582 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 CALD1Q05682 793 aaKnown RBP8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 DUSP27Q5VZP5 1158 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 BSNDQ8WZ55 320 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 RUNDC1Q96C34 613 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 DUOX1Q9NRD9 1551 aa8.64□□□□□ -1.03
CEACAM1-208ENST00000403461 ZNF609O15014 1411 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 ASTN2O75129 1339 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 MYO3BQ8WXR4 1341 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 PDE8AO60658 829 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 FURINP09958 794 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 ZNF16P17020 682 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 CDC27P30260 824 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 KRT24Q2M2I5 525 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 FBXO46Q6PJ61 603 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 ADAMTSL4Q6UY14 1074 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 ARMC9Q7Z3E5 817 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 CCDC191Q8NCU4 936 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 GLIS3Q8NEA6 775 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 ASAP3Q8TDY4 903 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 ZNF296Q8WUU4 475 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 TRIM11Q96F44 468 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 SRCIN1Q9C0H9 1055 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 MUC3BQ9H195 1237 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 CWC25Q9NXE8 425 aaPredicted RBP8.63□□□□□ -1.03
CEACAM1-208ENST00000403461 TRPM7Q96QT4 1865 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 NUP98P52948 1817 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 UBE2Q2LH0YL09 131 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 TBC1D8O95759 1140 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 GRIA4P48058 902 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 NXPE4Q6UWF7 544 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 CCDC146Q8IYE0 955 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 FOXD4L4Q8WXT5 416 aaPredicted RBP8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 MYD88Q99836 296 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 OSBPL7Q9BZF2 842 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 RNF19AQ9NV58 838 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 SOX13Q9UN79 622 aa8.62□□□□□ -1.03
CEACAM1-208ENST00000403461 A0A096LPE4 126 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 A0A1W2PPZ6 126 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 METTL12A8MUP2 240 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 FKTNO75072 461 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 TM4SF4P48230 202 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 DAB2P98082 770 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 NEXNQ0ZGT2 675 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 SPRED3Q2MJR0 410 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 APOBEC3FQ8IUX4 373 aaKnown RBP8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 DMRTC2Q8IXT2 367 aaPredicted RBP8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 GMLQ99445 158 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 COA1Q9GZY4 146 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 C12orf49Q9H741 205 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 PPME1Q9Y570 386 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 AK5Q9Y6K8 562 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 MED23Q9ULK4 1368 aa8.61□□□□□ -1.03
CEACAM1-208ENST00000403461 MYBBP1AQ9BQG0 1328 aaKnown RBP8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 XRCC5P13010 732 aaKnown RBP8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 ITPKAP23677 461 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 IGHMBP2P38935 993 aaKnown RBP8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 CTSWP56202 376 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 INHBEP58166 350 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 PSMD2Q13200 908 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 STRIP1Q5VSL9 837 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 MOB2Q70IA6 237 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 DTWD1Q8N5C7 304 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 SH2B1Q9NRF2 756 aaPredicted RBP8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 BSDC1Q9NW68 430 aaPredicted RBP8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 NOP53Q9NZM5 478 aaKnown RBP8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 LRRC37AA6NMS7 1700 aa8.6□□□□□ -1.03
CEACAM1-208ENST00000403461 PAPPA2Q9BXP8 1791 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 MANSC4A6NHS7 340 aaPredicted RBP8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 WNT10BO00744 389 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 EPHA1P21709 976 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 EIF4BP23588 611 aaKnown RBP8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 KCNJ4P48050 445 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 FCGRTP55899 365 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 GNAI1P63096 354 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 NBPF9Q3BBW0 867 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 DACT2Q5SW24 774 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 CCDC30Q5VVM6 783 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 PRAMEF18Q5VWM3 479 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 INTS3Q68E01 1043 aaKnown RBP8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 OTUD7BQ6GQQ9 843 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 METTL22Q9BUU2 404 aaPredicted RBP8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 BCL11AQ9H165 835 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 IFT57Q9NWB7 429 aa8.59□□□□□ -1.03
CEACAM1-208ENST00000403461 FAM8A1Q9UBU6 413 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms