RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 GJB2P29033 226 aa30.99■■■□□ 2.55
CGREF1-204ENST00000402550 PSMC4P43686 418 aa30.99■■■□□ 2.55
CGREF1-204ENST00000402550 QRICH1Q2TAL8 776 aa30.99■■■□□ 2.55
CGREF1-204ENST00000402550 CCAR1Q8IX12 1150 aaKnown RBP30.99■■■□□ 2.55
CGREF1-204ENST00000402550 SHCBP1Q8NEM2 672 aa30.99■■■□□ 2.55
CGREF1-204ENST00000402550 SMCHD1A6NHR9 2005 aa30.98■■■□□ 2.55
CGREF1-204ENST00000402550 PNMA6FA0A0J9YX94 578 aa30.98■■■□□ 2.55
CGREF1-204ENST00000402550 hCG_1642624A0A1W2PR95 340 aa30.98■■■□□ 2.55
CGREF1-204ENST00000402550 SLC25A27O95847 323 aa30.98■■■□□ 2.55
CGREF1-204ENST00000402550 ERCC3P19447 782 aa30.98■■■□□ 2.55
CGREF1-204ENST00000402550 MAPK4P31152 587 aa30.98■■■□□ 2.55
CGREF1-204ENST00000402550 NCAPG2Q86XI2 1143 aa30.97■■■□□ 2.55
CGREF1-204ENST00000402550 TRIM47Q96LD4 638 aa30.97■■■□□ 2.55
CGREF1-204ENST00000402550 MROH8Q9H579 483 aa30.97■■■□□ 2.55
CGREF1-204ENST00000402550 CCPG1Q9ULG6 757 aa30.97■■■□□ 2.55
CGREF1-204ENST00000402550 DTNBO60941 627 aa30.96■■■□□ 2.55
CGREF1-204ENST00000402550 TRAF1Q13077 416 aa30.96■■■□□ 2.55
CGREF1-204ENST00000402550 PFKFB3Q16875 520 aaPredicted RBP30.96■■■□□ 2.55
CGREF1-204ENST00000402550 PNMA2Q9UL42 364 aa30.96■■■□□ 2.55
CGREF1-204ENST00000402550 SCG2P13521 617 aa30.96■■■□□ 2.55
CGREF1-204ENST00000402550 FCGRTP55899 365 aa30.96■■■□□ 2.55
CGREF1-204ENST00000402550 CWC22Q9HCG8 908 aaKnown RBP30.96■■■□□ 2.55
CGREF1-204ENST00000402550 DOCK3Q8IZD9 2030 aa30.95■■■□□ 2.55
CGREF1-204ENST00000402550 FDPSP14324 419 aaKnown RBP30.95■■■□□ 2.54
CGREF1-204ENST00000402550 XBP1P17861 261 aa30.95■■■□□ 2.54
CGREF1-204ENST00000402550 WDR78Q5VTH9 848 aa30.95■■■□□ 2.54
CGREF1-204ENST00000402550 MGAMO43451 1857 aa30.95■■■□□ 2.54
CGREF1-204ENST00000402550 ZSWIM8A7E2V4 1837 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 hCG_1984214I3L0E3 225 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 TNPO2O14787 897 aaKnown RBP30.94■■■□□ 2.54
CGREF1-204ENST00000402550 PPP1R11O60927 126 aaPredicted RBP30.94■■■□□ 2.54
CGREF1-204ENST00000402550 ALAS1P13196 640 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 COPB2P35606 906 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 GPR142Q7Z601 462 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 FBXO11Q86XK2 927 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 ZNF713Q8N859 430 aaPredicted RBP30.94■■■□□ 2.54
CGREF1-204ENST00000402550 ALG1Q9BT22 464 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 AMNQ9BXJ7 453 aa30.94■■■□□ 2.54
CGREF1-204ENST00000402550 TAL1P17542 331 aaPredicted RBP30.93■■■□□ 2.54
CGREF1-204ENST00000402550 ARHGEF6Q15052 776 aa30.93■■■□□ 2.54
CGREF1-204ENST00000402550 PKN1Q16512 942 aa30.93■■■□□ 2.54
CGREF1-204ENST00000402550 HEATR3Q7Z4Q2 680 aa30.93■■■□□ 2.54
CGREF1-204ENST00000402550 TRERF1Q96PN7 1200 aa30.93■■■□□ 2.54
CGREF1-204ENST00000402550 HOMER2Q9NSB8 354 aa30.93■■■□□ 2.54
CGREF1-204ENST00000402550 PDCP20941 246 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 TKFCQ3LXA3 575 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 USH1GQ495M9 461 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 PLEKHH3Q7Z736 793 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 CHST13Q8NET6 341 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 PRDM10Q9NQV6 1147 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 STRNO43815 780 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 TRIM29Q14134 588 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 CCDC12Q8WUD4 166 aaPredicted RBP30.92■■■□□ 2.54
CGREF1-204ENST00000402550 COA7Q96BR5 231 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 RNF146Q9NTX7 359 aa30.92■■■□□ 2.54
CGREF1-204ENST00000402550 GNRH1P01148 92 aa30.91■■■□□ 2.54
CGREF1-204ENST00000402550 FBXO40Q9UH90 709 aa30.91■■■□□ 2.54
CGREF1-204ENST00000402550 PCDHA1Q9Y5I3 950 aa30.91■■■□□ 2.54
CGREF1-204ENST00000402550 PTPREP23469 700 aa30.9■■■□□ 2.54
CGREF1-204ENST00000402550 MUM1L1Q5H9M0 696 aa30.9■■■□□ 2.54
CGREF1-204ENST00000402550 GPKOWQ92917 476 aaPredicted RBP eCLIP30.9■■■□□ 2.54
CGREF1-204ENST00000402550 C8orf76Q96K31 380 aa30.9■■■□□ 2.54
CGREF1-204ENST00000402550 BARHL2Q9NY43 387 aa30.9■■■□□ 2.54
CGREF1-204ENST00000402550 GJD2Q9UKL4 321 aa30.9■■■□□ 2.54
CGREF1-204ENST00000402550 IVNS1ABPQ9Y6Y0 642 aa30.9■■■□□ 2.54
CGREF1-204ENST00000402550 LARP1BQ659C4 914 aaKnown RBP30.89■■■□□ 2.54
CGREF1-204ENST00000402550 WWC2Q6AWC2 1192 aa30.89■■■□□ 2.54
CGREF1-204ENST00000402550 CCDC148Q8NFR7 591 aa30.89■■■□□ 2.54
CGREF1-204ENST00000402550 ACAD9Q9H845 621 aa30.89■■■□□ 2.54
CGREF1-204ENST00000402550 SH3GLB2Q9NR46 395 aa30.89■■■□□ 2.54
CGREF1-204ENST00000402550 FCER1AP12319 257 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 OTOP1Q7RTM1 612 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 AIFM3Q96NN9 605 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 TRIM17Q9Y577 477 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 HOXD10P28358 340 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 NAPAP54920 295 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 MORN1Q5T089 497 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.88■■■□□ 2.53
CGREF1-204ENST00000402550 ABRAQ8N0Z2 381 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 FAM177A1Q8N128 213 aaPredicted RBP30.88■■■□□ 2.53
CGREF1-204ENST00000402550 CLEC4DQ8WXI8 215 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 VPS54Q9P1Q0 977 aa30.88■■■□□ 2.53
CGREF1-204ENST00000402550 ABCB11O95342 1321 aa30.87■■■□□ 2.53
CGREF1-204ENST00000402550 SLC15A5A6NIM6 579 aa30.87■■■□□ 2.53
CGREF1-204ENST00000402550 PDIA4P13667 645 aaKnown RBP30.87■■■□□ 2.53
CGREF1-204ENST00000402550 PPP1R18Q6NYC8 613 aa30.87■■■□□ 2.53
CGREF1-204ENST00000402550 SRRDQ9UH36 339 aa30.87■■■□□ 2.53
CGREF1-204ENST00000402550 H3BQV1 296 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 STXBP3O00186 592 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 GRB14Q14449 540 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 KCTD2Q14681 263 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 IFFO2Q5TF58 517 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 MMP19Q99542 508 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 NUDT12Q9BQG2 462 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 GABRQQ9UN88 632 aa30.86■■■□□ 2.53
CGREF1-204ENST00000402550 MRPL11Q9Y3B7 192 aaKnown RBP30.86■■■□□ 2.53
CGREF1-204ENST00000402550 ZNFX1Q9P2E3 1918 aaKnown RBP30.86■■■□□ 2.53
CGREF1-204ENST00000402550 NFIBO00712 420 aa30.85■■■□□ 2.53
CGREF1-204ENST00000402550 FOSBP53539 338 aa30.85■■■□□ 2.53
CGREF1-204ENST00000402550 ANKRD35Q8N283 1001 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms