RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ACTN4O43707 911 aaKnown RBP29.12■■■□□ 2.25
CPNE1-205ENST00000401607 TAL1P17542 331 aaPredicted RBP29.12■■■□□ 2.25
CPNE1-205ENST00000401607 USH1GQ495M9 461 aa29.12■■■□□ 2.25
CPNE1-205ENST00000401607 PDILTQ8N807 584 aa29.12■■■□□ 2.25
CPNE1-205ENST00000401607 RANBP17Q9H2T7 1088 aaKnown RBP29.12■■■□□ 2.25
CPNE1-205ENST00000401607 FZD1Q9UP38 647 aa29.12■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L15C9J2P7 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L13C9JLJ4 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L11C9JVI0 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L18D6R9N7 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L22D6RA61 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L17D6RBQ6 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L19D6RCP7 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L20D6RJB6 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 LONP1P36776 959 aaKnown RBP29.11■■■□□ 2.25
CPNE1-205ENST00000401607 PRPHP41219 470 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L24Q0WX57 530 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 USP17L6PQ6QN14 398 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 C11orf57Q6ZUT1 292 aaPredicted RBP29.11■■■□□ 2.25
CPNE1-205ENST00000401607 FAM160B2Q86V87 743 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 SCYL3Q8IZE3 742 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 CBX8Q9HC52 389 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 FEM1BQ9UK73 627 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 NEMFO60524 1076 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 MDM2Q00987 491 aaPredicted RBP29.11■■■□□ 2.25
CPNE1-205ENST00000401607 PNOCQ13519 176 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 ANP32BQ92688 251 aaKnown RBP29.11■■■□□ 2.25
CPNE1-205ENST00000401607 KIFC2Q96AC6 838 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 WRNIP1Q96S55 665 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 FBXO28Q9NVF7 368 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 ANO10Q9NW15 660 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 TUBE1Q9UJT0 475 aa29.11■■■□□ 2.25
CPNE1-205ENST00000401607 MEIS2O14770 477 aa29.1■■■□□ 2.25
CPNE1-205ENST00000401607 FOXN1O15353 648 aa29.1■■■□□ 2.25
CPNE1-205ENST00000401607 DTHD1Q6ZMT9 781 aa29.1■■■□□ 2.25
CPNE1-205ENST00000401607 OR52Z1P0C646 297 aa29.09■■■□□ 2.25
CPNE1-205ENST00000401607 CCDC173Q0VFZ6 552 aa29.09■■■□□ 2.25
CPNE1-205ENST00000401607 LPAR1Q92633 364 aa29.09■■■□□ 2.25
CPNE1-205ENST00000401607 ZKSCAN4Q969J2 545 aaPredicted RBP29.09■■■□□ 2.25
CPNE1-205ENST00000401607 PPP1R9BQ96SB3 815 aa29.09■■■□□ 2.25
CPNE1-205ENST00000401607 OPLAHO14841 1288 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 WDR46O15213 610 aaKnown RBP29.08■■■□□ 2.25
CPNE1-205ENST00000401607 CAVIN2O95810 425 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 ZNF165P49910 485 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 DGKZQ13574 1117 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 DHX58Q96C10 678 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 POLR2AP24928 1970 aaKnown RBP29.08■■■□□ 2.25
CPNE1-205ENST00000401607 TDP2O95551 362 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 LUZP1Q86V48 1076 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 POTEDQ86YR6 584 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 KLRG1Q96E93 195 aa29.08■■■□□ 2.25
CPNE1-205ENST00000401607 P2RX7Q99572 595 aaKnown RBP29.08■■■□□ 2.25
CPNE1-205ENST00000401607 WDR18Q9BV38 432 aa29.07■■■□□ 2.24
CPNE1-205ENST00000401607 MYH7BA7E2Y1 1941 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 AP3B2Q13367 1082 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 MTMR2Q13614 643 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 CCDC174Q6PII3 467 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 PDLIM2Q96JY6 352 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 ANO3Q9BYT9 981 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 BIN1O00499 593 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 SLC37A4O43826 429 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 PRR29P0C7W0 189 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 PTPRAP18433 802 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 POSTNQ15063 836 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 E2F4Q16254 413 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 SUPT20HL1Q3ZLR7 823 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 PPP4R3AQ6IN85 833 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 MTMR9Q96QG7 549 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 EMILIN3Q9NT22 766 aa29.06■■■□□ 2.24
CPNE1-205ENST00000401607 SLFN14P0C7P3 912 aa29.05■■■□□ 2.24
CPNE1-205ENST00000401607 NLRP12P59046 1061 aa29.05■■■□□ 2.24
CPNE1-205ENST00000401607 DPCR1Q3MIW9 517 aa29.05■■■□□ 2.24
CPNE1-205ENST00000401607 KANK3Q6NY19 840 aa29.05■■■□□ 2.24
CPNE1-205ENST00000401607 HOOK1Q9UJC3 728 aaKnown RBP29.05■■■□□ 2.24
CPNE1-205ENST00000401607 PCDHA5Q9Y5H7 936 aa29.05■■■□□ 2.24
CPNE1-205ENST00000401607 CDC25AP30304 524 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 TRAF1Q13077 416 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 IQCB1Q15051 598 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 GRAMD1CQ8IYS0 662 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 L3MBTL3Q96JM7 780 aaPredicted RBP29.04■■■□□ 2.24
CPNE1-205ENST00000401607 PICK1Q9NRD5 415 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 USP25Q9UHP3 1055 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 PHIPQ8WWQ0 1821 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 SMCHD1A6NHR9 2005 aa29.04■■■□□ 2.24
CPNE1-205ENST00000401607 PP2D1A8MPX8 630 aa29.03■■■□□ 2.24
CPNE1-205ENST00000401607 SPP2Q13103 211 aa29.03■■■□□ 2.24
CPNE1-205ENST00000401607 DLK2Q6UY11 383 aa29.03■■■□□ 2.24
CPNE1-205ENST00000401607 SH3RF1Q7Z6J0 888 aa29.03■■■□□ 2.24
CPNE1-205ENST00000401607 AS3MTQ9HBK9 375 aa29.03■■■□□ 2.24
CPNE1-205ENST00000401607 MCTP2Q6DN12 878 aa29.03■■■□□ 2.24
CPNE1-205ENST00000401607 SAMD1Q6SPF0 538 aaPredicted RBP29.03■■■□□ 2.24
CPNE1-205ENST00000401607 CRYGNQ8WXF5 182 aa29.03■■■□□ 2.24
CPNE1-205ENST00000401607 ADM5C9JUS6 153 aa29.02■■■□□ 2.24
CPNE1-205ENST00000401607 VCAM1P19320 739 aa29.02■■■□□ 2.24
CPNE1-205ENST00000401607 USP14P54578 494 aa29.02■■■□□ 2.24
CPNE1-205ENST00000401607 ZRSR1Q15695 479 aaKnown RBP29.02■■■□□ 2.24
CPNE1-205ENST00000401607 CALCRLQ16602 461 aa29.02■■■□□ 2.24
CPNE1-205ENST00000401607 NOL9Q5SY16 702 aaKnown RBP29.02■■■□□ 2.24
CPNE1-205ENST00000401607 DPY19L2Q6NUT2 758 aa29.02■■■□□ 2.24
CPNE1-205ENST00000401607 CEP57L1Q8IYX8 460 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms