RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ANKS1AQ92625 1134 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TNKSO95271 1327 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 POLR2DO15514 142 aaKnown RBP18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ASNSP08243 561 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 INPP5BP32019 993 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 IREB2P48200 963 aaKnown RBP18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 PRKG1Q13976 671 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SHROOM1Q2M3G4 852 aaPredicted RBP18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 UTP14CQ5TAP6 766 aaKnown RBP18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ENAHQ8N8S7 591 aaPredicted RBP18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ENOX1Q8TC92 643 aaKnown RBP18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CEP95Q96GE4 821 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CCDC34Q96HJ3 373 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 KANSL2Q9H9L4 492 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 MTMR4Q9NYA4 1195 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZBTB21Q9ULJ3 1066 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 PCDHB6Q9Y5E3 794 aa18.05■□□□□ 0.48
CHRFAM7A-203ENST00000401522 PHLPP2Q6ZVD8 1323 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 FOXN1O15353 648 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 FKBP1BP68106 108 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 MAP3K9P80192 1104 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 NR5A1Q13285 461 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 MORC3Q14149 939 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SPECC1Q5M775 1068 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 RCSD1Q6JBY9 416 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SERTAD1Q9UHV2 236 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 PASKQ96RG2 1323 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ACTN4O43707 911 aaKnown RBP18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 GRIN1Q05586 938 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 DMTNQ08495 405 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SEPT2Q15019 361 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CT47A1Q5JQC4 288 aaPredicted RBP18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 NOL9Q5SY16 702 aaKnown RBP18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SYT10Q6XYQ8 523 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ARMC9Q7Z3E5 817 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SCYL3Q8IZE3 742 aa18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZKSCAN4Q969J2 545 aaPredicted RBP18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 DDX41Q9UJV9 622 aaKnown RBP18.04■□□□□ 0.48
CHRFAM7A-203ENST00000401522 UNCXA6NJT0 531 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 BMP15O95972 392 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZNF18P17022 549 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZSCAN20P17040 1043 aaPredicted RBP18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ETF1P62495 437 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CST9Q5W186 159 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 HOMER1Q86YM7 354 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CCDC82Q8N4S0 544 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 GTPBP4Q9BZE4 634 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZNF408Q9H9D4 720 aa18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 RBM28Q9NW13 759 aaKnown RBP18.03■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ZSCAN12O43309 604 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 PRPF3O43395 683 aaKnown RBP18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CELF2O95319 508 aaKnown RBP18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TTLL1O95922 423 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CALM1P0DP23 149 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CALM2P0DP24 149 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CALM3P0DP25 149 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TBX2Q13207 712 aaPredicted RBP18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TTLL12Q14166 644 aaPredicted RBP18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 LDLRAD1Q5T700 205 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CATIPQ7Z7H3 387 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 SIAH1Q8IUQ4 282 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 ANKRD13AQ8IZ07 590 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 OXER1Q8TDS5 423 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 INTS13Q9NVM9 706 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 PAPPA2Q9BXP8 1791 aa18.02■□□□□ 0.48
CHRFAM7A-203ENST00000401522 TMEM232C9JQI7 657 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ARHGAP6O43182 974 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PRR29P0C7W0 189 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ERCC5P28715 1186 aaPredicted RBP18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 KRT2P35908 639 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 IFIT1BQ5T764 474 aaKnown RBP18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 MOB2Q70IA6 237 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 SPATA20Q8TB22 786 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 MKL1Q969V6 931 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 CSRNP2Q9H175 543 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 GBA2Q9HCG7 927 aaPredicted RBP18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PRDM10Q9NQV6 1147 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 NYAP2Q9P242 653 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 NFE2L3Q9Y4A8 694 aa18.02■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ATAD5Q96QE3 1844 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ICA1Q05084 483 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 FUT2Q10981 343 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 VGLL4Q14135 290 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 ELF2Q15723 593 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PHF20Q9BVI0 1012 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PICK1Q9NRD5 415 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 DOCK1Q14185 1865 aa18.01■□□□□ 0.47
CHRFAM7A-203ENST00000401522 EEF2P13639 858 aaKnown RBP18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 PTPRAP18433 802 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 CDK11BP21127 795 aaKnown RBP18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 FSTL1Q12841 308 aa18■□□□□ 0.47
CHRFAM7A-203ENST00000401522 CLEC10AQ8IUN9 316 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms