RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 M0QZ92 97 aa20.01■□□□□ 0.79
COL18A1-204ENST00000400337 DLATP10515 647 aaKnown RBP20.01■□□□□ 0.79
COL18A1-204ENST00000400337 PPP2R5DQ14738 602 aa20.01■□□□□ 0.79
COL18A1-204ENST00000400337 TTC31Q49AM3 519 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-204ENST00000400337 ARMCX5Q6P1M9 558 aa20.01■□□□□ 0.79
COL18A1-204ENST00000400337 DYNLL2Q96FJ2 89 aa20.01■□□□□ 0.79
COL18A1-204ENST00000400337 CNOT6LQ96LI5 555 aaKnown RBP20.01■□□□□ 0.79
COL18A1-204ENST00000400337 PIGSQ96S52 555 aa20.01■□□□□ 0.79
COL18A1-204ENST00000400337 PPANQ9NQ55 473 aaKnown RBP20.01■□□□□ 0.79
COL18A1-204ENST00000400337 IFNAR1P17181 557 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 GADL1Q6ZQY3 521 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 ZBTB8OSQ8IWT0 167 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 HAUS4Q9H6D7 363 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 NRBP1Q9UHY1 535 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 RCOR1Q9UKL0 485 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 ZNF500O60304 480 aaPredicted RBP20■□□□□ 0.79
COL18A1-204ENST00000400337 PABPC4Q13310 644 aaKnown RBP eCLIP20■□□□□ 0.792e-8■■■■□ 19.9
COL18A1-204ENST00000400337 GRAMD1CQ8IYS0 662 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 UBE2Q2Q8WVN8 375 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 MAGEF1Q9HAY2 307 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 HYOU1Q9Y4L1 999 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 CPSF1Q10570 1443 aaKnown RBP20■□□□□ 0.79
COL18A1-204ENST00000400337 GDF11O95390 407 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 P4HA1P13674 534 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 EPHA10Q5JZY3 1008 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 C11orf57Q6ZUT1 292 aaPredicted RBP20■□□□□ 0.79
COL18A1-204ENST00000400337 B4GALNT4Q76KP1 1039 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 OAS2P29728 719 aaKnown RBP20■□□□□ 0.79
COL18A1-204ENST00000400337 TUBGCP2Q9BSJ2 902 aa20■□□□□ 0.79
COL18A1-204ENST00000400337 CASP14P31944 242 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 YWHAEP62258 255 aaKnown RBP19.99■□□□□ 0.79
COL18A1-204ENST00000400337 ITIH3Q06033 890 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 ODR4Q5SWX8 454 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 PPM1KQ8N3J5 372 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 TBCKQ8TEA7 893 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 EPN1Q9Y6I3 576 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-204ENST00000400337 IGKV5-2P06315 115 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 HLFQ16534 295 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 LRCH2Q5VUJ6 765 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 C1orf112Q9NSG2 853 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 TMC4Q7Z404 712 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 NCAPG2Q86XI2 1143 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.99■□□□□ 0.799e-10■■■□□ 17.8
COL18A1-204ENST00000400337 ZNF215Q9UL58 517 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-204ENST00000400337 N4BP1O75113 896 aaKnown RBP19.99■□□□□ 0.79
COL18A1-204ENST00000400337 KRT71Q3SY84 523 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 TAOK1Q7L7X3 1001 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 MAIP1Q8WWC4 291 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 RAB17Q9H0T7 212 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 CUEDC2Q9H467 287 aa19.99■□□□□ 0.79
COL18A1-204ENST00000400337 GUCY2FP51841 1108 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 MECOMQ03112 1051 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 PPFIA1Q13136 1202 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 DMP1Q13316 513 aaPredicted RBP19.98■□□□□ 0.79
COL18A1-204ENST00000400337 CROCCP2Q86T23 111 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 AIFM3Q96NN9 605 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 STIM2Q9P246 746 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 PYCARDQ9ULZ3 195 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 TSPOAP1O95153 1857 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 HGSO14964 777 aaPredicted RBP19.98■□□□□ 0.79
COL18A1-204ENST00000400337 YARSP54577 528 aaKnown RBP19.98■□□□□ 0.79
COL18A1-204ENST00000400337 MTMR3Q13615 1198 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 FYB2Q5VWT5 728 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 ARHGAP27Q6ZUM4 889 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 CCDC89Q8N998 374 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 ODF2LQ9ULJ1 636 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 ARAP3Q8WWN8 1544 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 CDC25AP30304 524 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 GEN1Q17RS7 908 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 USP17L2Q6R6M4 530 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 ANKRD13CQ8N6S4 541 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 KRIT1O00522 736 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 MCAMP43121 646 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 KANSL2Q9H9L4 492 aa19.98■□□□□ 0.79
COL18A1-204ENST00000400337 PTPN21Q16825 1174 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 COA7Q96BR5 231 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 AK8Q96MA6 479 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 KRT15P19012 456 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 PLCD3Q8N3E9 789 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 FEZ2Q9UHY8 353 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-204ENST00000400337 LRRIQ4A6NIV6 560 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 HSPA1LP34931 641 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 EXOC3L4Q17RC7 722 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 CASC4Q6P4E1 433 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 SPATA24Q86W54 205 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 POLGP54098 1239 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-204ENST00000400337 FAM184BQ9ULE4 1060 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 MAP3K4Q9Y6R4 1608 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 IFNB1P01574 187 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 H2AFZP0C0S5 128 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 GOLGA8FQ08AF8 430 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 GOLGA8DPQ0D2H9 430 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 H2AFVQ71UI9 128 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 SULF1Q8IWU6 871 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 SMC1BQ8NDV3 1235 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 PNMA2Q9UL42 364 aa19.97■□□□□ 0.79
COL18A1-204ENST00000400337 A6NNZ2 444 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 TBC1D8O95759 1140 aa19.96■□□□□ 0.79
COL18A1-204ENST00000400337 TUBB8Q3ZCM7 444 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms