RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 UBE2SQ16763 222 aa19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 NEK8Q86SG6 692 aa19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 C4orf32Q8N8J7 132 aa19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 PRPF38AQ8NAV1 312 aaKnown RBP19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 CDCA5Q96FF9 252 aa19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 SLF1Q9BQI6 1058 aa19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 HPSEQ9Y251 543 aa19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 WDR90Q96KV7 1748 aa19.44■□□□□ 0.7
CSNK2A1-203ENST00000400217 VCAM1P19320 739 aa19.43■□□□□ 0.7
CSNK2A1-203ENST00000400217 IREB2P48200 963 aaKnown RBP19.43■□□□□ 0.7
CSNK2A1-203ENST00000400217 GRIN1Q05586 938 aa19.43■□□□□ 0.7
CSNK2A1-203ENST00000400217 ARL6IP4Q66PJ3 421 aaKnown RBP19.43■□□□□ 0.7
CSNK2A1-203ENST00000400217 SOCS7O14512 581 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 CTAGE5O15320 804 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 ZNF202O95125 648 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 DEKP35659 375 aaKnown RBP19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 SYKP43405 635 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 ORC2Q13416 577 aaPredicted RBP19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 DGKZQ13574 1117 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 VGLL4Q14135 290 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 LETM2Q2VYF4 491 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 MCTP2Q6DN12 878 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 CCDC174Q6PII3 467 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 SAMD1Q6SPF0 538 aaPredicted RBP19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 RBM43Q6ZSC3 357 aaKnown RBP19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 C12orf42Q96LP6 360 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 TANGO6Q9C0B7 1094 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 CSRNP2Q9H175 543 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 FAM13BQ9NYF5 915 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 AFG3L2Q9Y4W6 797 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 CSADQ9Y600 493 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 SNCAIPQ9Y6H5 919 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 PHIPQ8WWQ0 1821 aa19.42■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L15C9J2P7 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L13C9JLJ4 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L11C9JVI0 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L18D6R9N7 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L22D6RA61 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L17D6RBQ6 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L19D6RCP7 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L20D6RJB6 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 LAD1O00515 517 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 MEIS2O14770 477 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L24Q0WX57 530 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 SPECC1Q5M775 1068 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 USP17L6PQ6QN14 398 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 TEX2Q8IWB9 1127 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 CCNT1O60563 726 aaKnown RBP19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 FLOT1O75955 427 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 HMGCS2P54868 508 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 AP3B2Q13367 1082 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 TIGD1Q96MW7 591 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 KCNH3Q9ULD8 1083 aa19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
CSNK2A1-203ENST00000400217 VWA3AA6NCI4 1184 aa19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 FOSP01100 380 aaPredicted RBP19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 L1TD1Q5T7N2 865 aaKnown RBP19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 LDHDQ86WU2 507 aa19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 RBM46Q8TBY0 533 aaKnown RBP19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 SDF4Q9BRK5 362 aa19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 PPP1R9AQ9ULJ8 1098 aa19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 CLEC11AQ9Y240 323 aa19.4■□□□□ 0.7
CSNK2A1-203ENST00000400217 ABCB11O95342 1321 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 OPLAHO14841 1288 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 ICAM1P05362 532 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 FDX1P10109 184 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 TAL1P17542 331 aaPredicted RBP19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 PRPHP41219 470 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 MRE11P49959 708 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 SH3D19Q5HYK7 790 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 CKAP2LQ8IYA6 745 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 TMEM60Q9H2L4 133 aa19.39■□□□□ 0.69
CSNK2A1-203ENST00000400217 PIK3CDO00329 1044 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 EDIL3O43854 480 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 NEMFO60524 1076 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 TTLL12Q14166 644 aaPredicted RBP19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 IL17AQ16552 155 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 DTHD1Q6ZMT9 781 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 ANKRD13AQ8IZ07 590 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 NAP1L4Q99733 375 aaKnown RBP19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 FUCA2Q9BTY2 467 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 ANO3Q9BYT9 981 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 GRPEL1Q9HAV7 217 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 SLC38A10Q9HBR0 1119 aa19.38■□□□□ 0.69
CSNK2A1-203ENST00000400217 PAPPA2Q9BXP8 1791 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 ZNF536O15090 1300 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 ZBED4O75132 1171 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 CCDC192P0DO97 292 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 LONP1P36776 959 aaKnown RBP19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 PPP4R3AQ6IN85 833 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 USP49Q70CQ1 688 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 ARMC9Q7Z3E5 817 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 CCPG1Q9ULG6 757 aa19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 CTDP1Q9Y5B0 961 aaPredicted RBP19.37■□□□□ 0.69
CSNK2A1-203ENST00000400217 SMCHD1A6NHR9 2005 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms