RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MEIS2O14770 477 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 SPTLC2O15270 562 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 SLC37A4O43826 429 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
SKA3-203ENST00000400018 ITGBL1O95965 494 aaPredicted RBP13.37□□□□□ -0.27
SKA3-203ENST00000400018 ADCY7P51828 1080 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 PTGDRQ13258 359 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 ISM2Q6H9L7 571 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 STAMQ92783 540 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 ZMYND12Q9H0C1 365 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 COL20A1Q9P218 1284 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 ATP6V1DQ9Y5K8 247 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 DOCK1Q14185 1865 aa13.37□□□□□ -0.27
SKA3-203ENST00000400018 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 CASP1P29466 404 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
SKA3-203ENST00000400018 ANKRD13AQ8IZ07 590 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
SKA3-203ENST00000400018 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
SKA3-203ENST00000400018 MTMR8Q96EF0 704 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 SLC10A4Q96EP9 437 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 EPSTI1Q96J88 318 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 FOXP1Q9H334 677 aaPredicted RBP13.36□□□□□ -0.27
SKA3-203ENST00000400018 DACT1Q9NYF0 836 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 VWA3AA6NCI4 1184 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 GOLGA6L4A6NEF3 574 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 TMEM132BQ14DG7 1078 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 TTC38Q5R3I4 469 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 NSMFQ6X4W1 530 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 GAS2L3Q86XJ1 694 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 CCAR1Q8IX12 1150 aaKnown RBP13.36□□□□□ -0.27
SKA3-203ENST00000400018 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 GBA2Q9HCG7 927 aaPredicted RBP13.36□□□□□ -0.27
SKA3-203ENST00000400018 TXNRD2Q9NNW7 524 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 PRDM4Q9UKN5 801 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
SKA3-203ENST00000400018 FOXN1O15353 648 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 PTGS1P23219 599 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 NDUFA8P51970 172 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 HUNKP57058 714 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
SKA3-203ENST00000400018 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 RTEL1Q9NZ71 1219 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 LAMA2P24043 3122 aaKnown RBP13.35□□□□□ -0.27
SKA3-203ENST00000400018 CALML3P27482 149 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 FSTL1Q12841 308 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 Q3C1V9 767 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 SHC4Q6S5L8 630 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 C6orf50Q9HD87 102 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 BTBD7Q9P203 1132 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 SCN4AP35499 1836 aa13.35□□□□□ -0.27
SKA3-203ENST00000400018 VWA5AO00534 786 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 IL31RAQ8NI17 732 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 CSRNP2Q9H175 543 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 TMOD4Q9NZQ9 345 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 RCOR1Q9UKL0 485 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 WDR90Q96KV7 1748 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 A0A087X0B3 334 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 SPDYE16A6NNV3 312 aaPredicted RBP13.34□□□□□ -0.27
SKA3-203ENST00000400018 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
SKA3-203ENST00000400018 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
SKA3-203ENST00000400018 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
SKA3-203ENST00000400018 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
SKA3-203ENST00000400018 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
SKA3-203ENST00000400018 BRMS1Q9HCU9 246 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 PPP1R9AQ9ULJ8 1098 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
SKA3-203ENST00000400018 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.27
SKA3-203ENST00000400018 ARMC9Q7Z3E5 817 aa13.33□□□□□ -0.27
SKA3-203ENST00000400018 CHURC1Q8WUH1 139 aa13.33□□□□□ -0.27
SKA3-203ENST00000400018 WDR18Q9BV38 432 aa13.33□□□□□ -0.27
SKA3-203ENST00000400018 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.27
SKA3-203ENST00000400018 AS3MTQ9HBK9 375 aa13.33□□□□□ -0.27
SKA3-203ENST00000400018 CFAP45Q9UL16 551 aa13.33□□□□□ -0.27
SKA3-203ENST00000400018 COL11A1P12107 1806 aaPredicted RBP13.33□□□□□ -0.28
SKA3-203ENST00000400018 MMP14P50281 582 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
SKA3-203ENST00000400018 BCAS3Q9H6U6 928 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 PAPPA2Q9BXP8 1791 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 KIF3CO14782 793 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 UBE2HP62256 183 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 MOGSQ13724 837 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 ERO1BQ86YB8 467 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 CCDC148Q8NFR7 591 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 CUL5Q93034 780 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 PTPN18Q99952 460 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 RIC8AQ9NPQ8 531 aa13.33□□□□□ -0.28
SKA3-203ENST00000400018 CTDP1Q9Y5B0 961 aaPredicted RBP13.33□□□□□ -0.28
SKA3-203ENST00000400018 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 CLCN1P35523 988 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms