RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SPICE1Q8N0Z3 855 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 CCDC148Q8NFR7 591 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
USP16-204ENST00000399976 EFCC1Q9HA90 598 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 SENP2Q9HC62 589 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 SEC63Q9UGP8 760 aaKnown RBP8.71□□□□□ -1.02
USP16-204ENST00000399976 CPA4Q9UI42 421 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 DOCK3Q8IZD9 2030 aa8.71□□□□□ -1.02
USP16-204ENST00000399976 RBM47A0AV96 593 aaKnown RBP8.7□□□□□ -1.02
USP16-204ENST00000399976 AP3B2Q13367 1082 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 CUL4AQ13619 759 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 SLC35G1Q2M3R5 365 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 SRBD1Q8N5C6 995 aaKnown RBP8.7□□□□□ -1.02
USP16-204ENST00000399976 NUP88Q99567 741 aaPredicted RBP8.7□□□□□ -1.02
USP16-204ENST00000399976 R3HDMLQ9H3Y0 253 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 FBXO28Q9NVF7 368 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 BARHL2Q9NY43 387 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 ADD3Q9UEY8 706 aaKnown RBP8.7□□□□□ -1.02
USP16-204ENST00000399976 CCPG1Q9ULG6 757 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 ASB14A6NK59 587 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 FOSP01100 380 aaPredicted RBP8.7□□□□□ -1.02
USP16-204ENST00000399976 ERCC3P19447 782 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 PSMC4P43686 418 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 ORC2Q13416 577 aaPredicted RBP8.7□□□□□ -1.02
USP16-204ENST00000399976 STK11IPQ8N1F8 1099 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 BICD2Q8TD16 824 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 MMP19Q99542 508 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 SEZ6LQ9BYH1 1024 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 Q9Y3F1 56 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 SMCHD1A6NHR9 2005 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 TNPO2O14787 897 aaKnown RBP8.7□□□□□ -1.02
USP16-204ENST00000399976 FGD1P98174 961 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 APOBRQ0VD83 1088 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 DGKZQ13574 1117 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 Q3C1V9 767 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 TTBK2Q6IQ55 1244 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 TRIM22Q8IYM9 498 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 ANP32EQ9BTT0 268 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 ZMYND12Q9H0C1 365 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 EHMT1Q9H9B1 1298 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 RIC8AQ9NPQ8 531 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 RNF146Q9NTX7 359 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 KIF3AQ9Y496 699 aa8.7□□□□□ -1.02
USP16-204ENST00000399976 MYH7BA7E2Y1 1941 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 FRMPD2Q68DX3 1309 aaPredicted RBP8.69□□□□□ -1.02
USP16-204ENST00000399976 MSCO60682 206 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 HMGCRP04035 888 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 CTGFP29279 349 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
USP16-204ENST00000399976 NEK4P51957 841 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 LBX1P52954 281 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 KCTD2Q14681 263 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 CD99L2Q8TCZ2 262 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 TRERF1Q96PN7 1200 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
USP16-204ENST00000399976 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 CYP39A1Q9NYL5 469 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 TPCN1Q9ULQ1 816 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 WDR81Q562E7 1941 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 SCG2P13521 617 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 CALML3P27482 149 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 CDC27P30260 824 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 KCNV1Q6PIU1 500 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 MOXD1Q6UVY6 613 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 NAP1L4Q99733 375 aaKnown RBP8.69□□□□□ -1.02
USP16-204ENST00000399976 PORCNQ9H237 461 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 VTA1Q9NP79 307 aa8.69□□□□□ -1.02
USP16-204ENST00000399976 COL9A3Q14050 684 aaPredicted RBP8.68□□□□□ -1.02
USP16-204ENST00000399976 CHST3Q7LGC8 479 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 MICU3Q86XE3 530 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 MORC2Q9Y6X9 1032 aaPredicted RBP8.68□□□□□ -1.02
USP16-204ENST00000399976 STXBP3O00186 592 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 OPLAHO14841 1288 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 NKRFO15226 690 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP16-204ENST00000399976 PPP1R11O60927 126 aaPredicted RBP8.68□□□□□ -1.02
USP16-204ENST00000399976 XBP1P17861 261 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 GNA11P29992 359 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 SSRP1Q08945 709 aaKnown RBP8.68□□□□□ -1.02
USP16-204ENST00000399976 SCRN1Q12765 414 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 PKN1Q16512 942 aa8.68□□□□□ -1.02
USP16-204ENST00000399976 RAVER2Q9HCJ3 691 aaKnown RBP8.68□□□□□ -1.02
USP16-204ENST00000399976 A1CFQ9NQ94 594 aaKnown RBP8.68□□□□□ -1.02
USP16-204ENST00000399976 GPHNQ9NQX3 736 aaPredicted RBP8.68□□□□□ -1.02
USP16-204ENST00000399976 PLEKHA8P1O95397 391 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 CYP3A4P08684 503 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 ADORA2AP29274 412 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 IKQ13123 557 aaPredicted RBP8.67□□□□□ -1.02
USP16-204ENST00000399976 GRM1Q13255 1194 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 MAML3Q96JK9 1138 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 FGD4Q96M96 766 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 PIGSQ96S52 555 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 PAGR1Q9BTK6 254 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 M0R2N6 131 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 MAFGO15525 162 aa8.67□□□□□ -1.02
USP16-204ENST00000399976 UBXN2AP68543 259 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms