RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 FEM1BQ9UK73 627 aa21.62■■□□□ 1.05
UFD1-202ENST00000399523 Q9Y3F1 56 aa21.62■■□□□ 1.05
UFD1-202ENST00000399523 SLC4A4Q9Y6R1 1079 aa21.62■■□□□ 1.05
UFD1-202ENST00000399523 SOWAHBA6NEL2 793 aa21.61■■□□□ 1.05
UFD1-202ENST00000399523 ASB14A6NK59 587 aa21.61■■□□□ 1.05
UFD1-202ENST00000399523 DYNC1LI2O43237 492 aaPredicted RBP21.61■■□□□ 1.05
UFD1-202ENST00000399523 PSMC6P62333 389 aa21.61■■□□□ 1.05
UFD1-202ENST00000399523 UBE3CQ15386 1083 aa21.61■■□□□ 1.05
UFD1-202ENST00000399523 PHOSPHO2Q8TCD6 241 aa21.61■■□□□ 1.05
UFD1-202ENST00000399523 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.61■■□□□ 1.058e-9■■■□□ 14.6
UFD1-202ENST00000399523 MYH4Q9Y623 1939 aa21.61■■□□□ 1.05
UFD1-202ENST00000399523 SCN5AQ14524 2016 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 PI4K2BG5E9Z4 385 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 RLBP1P12271 317 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 PTGS1P23219 599 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 TAP1Q03518 808 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 FTSJ3Q8IY81 847 aaKnown RBP21.6■■□□□ 1.05
UFD1-202ENST00000399523 MKL1Q969V6 931 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 SLC9A7Q96T83 725 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 ACAD9Q9H845 621 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 ARPP21Q9UBL0 812 aaPredicted RBP21.6■■□□□ 1.05
UFD1-202ENST00000399523 CLIP2Q9UDT6 1046 aa21.6■■□□□ 1.05
UFD1-202ENST00000399523 IGKV6D-41A0A0C4DH26 115 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 CHGBP05060 677 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 SUPT20HL2P0C7V6 817 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 FDX1P10109 184 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 SBK1Q52WX2 424 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 IQSEC1Q6DN90 963 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 TAPT1Q6NXT6 567 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 ARNTL2Q8WYA1 636 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 A1CFQ9NQ94 594 aaKnown RBP21.59■■□□□ 1.05
UFD1-202ENST00000399523 HOMER2Q9NSB8 354 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 SYNPO2Q9UMS6 1093 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 MYH7P12883 1935 aa21.59■■□□□ 1.05
UFD1-202ENST00000399523 FAM86C2PA6NEL3 165 aa21.58■■□□□ 1.05
UFD1-202ENST00000399523 ARHGEF15O94989 841 aa21.58■■□□□ 1.05
UFD1-202ENST00000399523 IFIT2P09913 472 aaKnown RBP21.58■■□□□ 1.05
UFD1-202ENST00000399523 ACTN1P12814 892 aa21.58■■□□□ 1.05
UFD1-202ENST00000399523 DEFB128Q7Z7B8 93 aa21.58■■□□□ 1.05
UFD1-202ENST00000399523 KIF1BPQ96EK5 621 aa21.58■■□□□ 1.05
UFD1-202ENST00000399523 MKNK2Q9HBH9 465 aa21.58■■□□□ 1.05
UFD1-202ENST00000399523 PDGFCQ9NRA1 345 aa21.58■■□□□ 1.05
UFD1-202ENST00000399523 TRMT13Q9NUP7 481 aaKnown RBP21.58■■□□□ 1.05
UFD1-202ENST00000399523 LPXNO60711 386 aa21.57■■□□□ 1.04
UFD1-202ENST00000399523 CYP2C9P11712 490 aa21.57■■□□□ 1.04
UFD1-202ENST00000399523 GRB10Q13322 594 aa21.57■■□□□ 1.04
UFD1-202ENST00000399523 RPAP2Q8IXW5 612 aaPredicted RBP21.57■■□□□ 1.04
UFD1-202ENST00000399523 GMCL1P1Q8NEA9 526 aa21.57■■□□□ 1.04
UFD1-202ENST00000399523 TET1Q8NFU7 2136 aa21.57■■□□□ 1.04
UFD1-202ENST00000399523 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
UFD1-202ENST00000399523 BOLA2Q9H3K6 86 aa21.57■■□□□ 1.04
UFD1-202ENST00000399523 CD320Q9NPF0 282 aa21.57■■□□□ 1.04
UFD1-202ENST00000399523 TNKSO95271 1327 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 ATP5JP18859 108 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 RFC2P35250 354 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 TMEM63BQ5T3F8 832 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 ALYREFQ86V81 257 aaKnown RBP21.56■■□□□ 1.04
UFD1-202ENST00000399523 HERC6Q8IVU3 1022 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 HAUS7Q99871 368 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 RNF146Q9NTX7 359 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 COG6Q9Y2V7 657 aa21.56■■□□□ 1.04
UFD1-202ENST00000399523 DDX49Q9Y6V7 483 aaKnown RBP21.56■■□□□ 1.04
UFD1-202ENST00000399523 ZNF536O15090 1300 aa21.55■■□□□ 1.04
UFD1-202ENST00000399523 KIF28PB7ZC32 967 aa21.55■■□□□ 1.04
UFD1-202ENST00000399523 TKFCQ3LXA3 575 aa21.55■■□□□ 1.04
UFD1-202ENST00000399523 MTMR4Q9NYA4 1195 aa21.55■■□□□ 1.04
UFD1-202ENST00000399523 BMP3P12645 472 aa21.54■■□□□ 1.04
UFD1-202ENST00000399523 GIMAP6Q6P9H5 292 aa21.54■■□□□ 1.04
UFD1-202ENST00000399523 FBXO16Q8IX29 292 aaPredicted RBP21.54■■□□□ 1.04
UFD1-202ENST00000399523 CEP95Q96GE4 821 aa21.54■■□□□ 1.04
UFD1-202ENST00000399523 STRBPQ96SI9 672 aaKnown RBP21.54■■□□□ 1.04
UFD1-202ENST00000399523 VTA1Q9NP79 307 aa21.54■■□□□ 1.04
UFD1-202ENST00000399523 LMCD1Q9NZU5 365 aa21.54■■□□□ 1.04
UFD1-202ENST00000399523 SCN10AQ9Y5Y9 1956 aa21.54■■□□□ 1.04
UFD1-202ENST00000399523 GSG1L2A8MUP6 293 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 PRR33A8MZF0 331 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 PURAQ00577 322 aaKnown RBP21.53■■□□□ 1.04
UFD1-202ENST00000399523 DUSP28Q4G0W2 176 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 EEPD1Q7L9B9 569 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 STK11IPQ8N1F8 1099 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 MORC4Q8TE76 937 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 TRERF1Q96PN7 1200 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 POLR3EQ9NVU0 708 aa21.53■■□□□ 1.04
UFD1-202ENST00000399523 PITPNM1O00562 1244 aa21.52■■□□□ 1.04
UFD1-202ENST00000399523 TTLL1O95922 423 aa21.52■■□□□ 1.04
UFD1-202ENST00000399523 IQCF3P0C7M6 154 aa21.52■■□□□ 1.04
UFD1-202ENST00000399523 SLFN13Q68D06 897 aa21.52■■□□□ 1.04
UFD1-202ENST00000399523 ZSCAN25Q6NSZ9 544 aa21.52■■□□□ 1.04
UFD1-202ENST00000399523 KIAA1211Q6ZU35 1233 aa21.52■■□□□ 1.04
UFD1-202ENST00000399523 LRRC47Q8N1G4 583 aaKnown RBP21.52■■□□□ 1.04
UFD1-202ENST00000399523 MINDY4BA8MYZ0 360 aa21.51■■□□□ 1.03
UFD1-202ENST00000399523 TMEM232C9JQI7 657 aa21.51■■□□□ 1.03
UFD1-202ENST00000399523 STAT2P52630 851 aa21.51■■□□□ 1.03
UFD1-202ENST00000399523 SPRED2Q7Z698 418 aa21.51■■□□□ 1.03
UFD1-202ENST00000399523 ZNF444Q8N0Y2 327 aaPredicted RBP21.51■■□□□ 1.03
UFD1-202ENST00000399523 CHURC1Q8WUH1 139 aa21.51■■□□□ 1.03
UFD1-202ENST00000399523 CYP39A1Q9NYL5 469 aa21.51■■□□□ 1.03
UFD1-202ENST00000399523 TANC1Q9C0D5 1861 aa21.5■■□□□ 1.03
UFD1-202ENST00000399523 BAIAP3O94812 1187 aa21.5■■□□□ 1.03
UFD1-202ENST00000399523 FAM160B2Q86V87 743 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms