RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 CDC37Q16543 378 aaPredicted RBP17.2■□□□□ 0.34
COL25A1-201ENST00000399126 TBCKQ8TEA7 893 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 SPON1Q9HCB6 807 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 ADCY5O95622 1261 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 BMP15O95972 392 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
COL25A1-201ENST00000399126 NONOQ15233 471 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL25A1-201ENST00000399126 DHX58Q96C10 678 aa17.2■□□□□ 0.34
COL25A1-201ENST00000399126 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
COL25A1-201ENST00000399126 MORC2Q9Y6X9 1032 aaPredicted RBP17.2■□□□□ 0.34
COL25A1-201ENST00000399126 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 ACTN4O43707 911 aaKnown RBP17.19■□□□□ 0.34
COL25A1-201ENST00000399126 EDIL3O43854 480 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 IQCB1Q15051 598 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 GMCL1Q96IK5 515 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 CCNT1O60563 726 aaKnown RBP17.19■□□□□ 0.34
COL25A1-201ENST00000399126 BMP3P12645 472 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 CAP2P40123 477 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 MDM2Q00987 491 aaPredicted RBP17.19■□□□□ 0.34
COL25A1-201ENST00000399126 KIF4BQ2VIQ3 1234 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 PRAMEF18Q5VWM3 479 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 KRT25Q7Z3Z0 450 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 FZD1Q9UP38 647 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
COL25A1-201ENST00000399126 SBF1O95248 1867 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 PP2D1A8MPX8 630 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 hCG_1984214I3L0E3 225 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 TBC1D12O60347 775 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 CASP1P29466 404 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 TAF3Q5VWG9 929 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 ZNF713Q8N859 430 aaPredicted RBP17.18■□□□□ 0.34
COL25A1-201ENST00000399126 TRPM4Q8TD43 1214 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 DPF2Q92785 391 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 GTPBP4Q9BZE4 634 aaKnown RBP17.18■□□□□ 0.34
COL25A1-201ENST00000399126 ANO10Q9NW15 660 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 ZSCAN20P17040 1043 aaPredicted RBP17.18■□□□□ 0.34
COL25A1-201ENST00000399126 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.18■□□□□ 0.34
COL25A1-201ENST00000399126 PCDHA5Q9Y5H7 936 aa17.18■□□□□ 0.34
COL25A1-201ENST00000399126 PHF20L1A8MW92 1017 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USH1GQ495M9 461 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 FAM83BQ5T0W9 1011 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 NEK8Q86SG6 692 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 DHX40Q8IX18 779 aaKnown RBP17.17■□□□□ 0.34
COL25A1-201ENST00000399126 ARHGEF10LQ9HCE6 1279 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 RIC8AQ9NPQ8 531 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 TMX2Q9Y320 296 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 PCDHA1Q9Y5I3 950 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L15C9J2P7 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L13C9JLJ4 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L11C9JVI0 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L18D6R9N7 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L22D6RA61 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L17D6RBQ6 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L19D6RCP7 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L20D6RJB6 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 OFD1O75665 1012 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 TNNI2P48788 182 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L24Q0WX57 530 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 DGKZQ13574 1117 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 STAMQ92783 540 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 DEFB129Q9H1M3 183 aa17.17■□□□□ 0.34
COL25A1-201ENST00000399126 DICER1Q9UPY3 1922 aaKnown RBP17.16■□□□□ 0.34
COL25A1-201ENST00000399126 MAP3K10Q02779 954 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 NBPF12Q5TAG4 269 aaPredicted RBP17.16■□□□□ 0.34
COL25A1-201ENST00000399126 SYDE2Q5VT97 1194 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 POLR2AP24928 1970 aaKnown RBP17.16■□□□□ 0.34
COL25A1-201ENST00000399126 TDP2O95551 362 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 BMP6P22004 513 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 POSTNQ15063 836 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 AOPEPQ8N6M6 819 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 PSTPIP2Q9H939 334 aa17.16■□□□□ 0.34
COL25A1-201ENST00000399126 AFMP43652 599 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
COL25A1-201ENST00000399126 NLRP12P59046 1061 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 SGSM3Q96HU1 749 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 P2RX7Q99572 595 aaKnown RBP17.15■□□□□ 0.34
COL25A1-201ENST00000399126 PRR12Q9ULL5 1215 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 SLC37A4O43826 429 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
COL25A1-201ENST00000399126 ANGEL2Q5VTE6 544 aaKnown RBP17.15■□□□□ 0.34
COL25A1-201ENST00000399126 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
COL25A1-201ENST00000399126 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 CUL5Q93034 780 aa17.15■□□□□ 0.34
COL25A1-201ENST00000399126 NEMFO60524 1076 aa17.14■□□□□ 0.34
COL25A1-201ENST00000399126 EPS15P42566 896 aa17.14■□□□□ 0.34
COL25A1-201ENST00000399126 TNFAIP1Q13829 316 aa17.14■□□□□ 0.34
COL25A1-201ENST00000399126 LMNB1P20700 586 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 KARSQ15046 597 aaKnown RBP17.14■□□□□ 0.33
COL25A1-201ENST00000399126 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 UIMC1Q96RL1 719 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 FBXO28Q9NVF7 368 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 INPP5BP32019 993 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 E2F4Q16254 413 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms