RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 QRICH1Q2TAL8 776 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 PAWRQ96IZ0 340 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 MTA3Q9BTC8 594 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 DDX20Q9UHI6 824 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 WDR19Q8NEZ3 1342 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 PDE4DIPQ5VU43 2346 aa16.42■□□□□ 0.22
HLA-DQB1-202ENST00000399079 DNAH12Q6ZR08 3092 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 ASTN1O14525 1302 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 PFASO15067 1338 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SOWAHBA6NEL2 793 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CPA1P15085 419 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 RXRAP19793 462 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 MNX1P50219 401 aaPredicted RBP16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 BAATQ14032 418 aaPredicted RBP16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 MAMDC4Q6UXC1 1216 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 RAB11FIP4Q86YS3 637 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SNX14Q9Y5W7 946 aa16.41■□□□□ 0.22
HLA-DQB1-202ENST00000399079 PTPDC1A2A3K4 754 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CCDC69A6NI79 296 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SEPT4O43236 478 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CYTH3O43739 400 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 ZNF865P0CJ78 1059 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 LIFRP42702 1097 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 ZNF467Q7Z7K2 595 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 KCNB2Q92953 911 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 CNPY2Q9Y2B0 182 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SYNGAP1Q96PV0 1343 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 KRT32Q14532 448 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 SLC30A10Q6XR72 485 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 ARMCX2Q7L311 632 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 DHX32Q7L7V1 743 aaKnown RBP16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 FBXO11Q86XK2 927 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 HOMER1Q86YM7 354 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 MSL3Q8N5Y2 521 aaKnown RBP16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 MTMR8Q96EF0 704 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
HLA-DQB1-202ENST00000399079 MSCO60682 206 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PPP1R11O60927 126 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 DDAH1O94760 285 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CALML3P27482 149 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 RPS6P62753 249 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 RNF207Q6ZRF8 634 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ANKLE1Q8NAG6 615 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 TBC1D5Q92609 795 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 LENG1Q96BZ8 264 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PIGSQ96S52 555 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PNMA2Q9UL42 364 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 SLC12A7Q9Y666 1083 aa16.39■□□□□ 0.21
HLA-DQB1-202ENST00000399079 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ZBTB5O15062 677 aa16.38■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CAPN2P17655 700 aa16.38■□□□□ 0.21
HLA-DQB1-202ENST00000399079 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CTCFLQ8NI51 663 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ZHX1Q9UKY1 873 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ABCB11O95342 1321 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 MCM3APO60318 1980 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PLEKHA8P1O95397 391 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ACVR2BQ13705 512 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 GJC2Q5T442 439 aaPredicted RBP16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 NECAB2Q7Z6G3 386 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 MAP3K14Q99558 947 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 AMNQ9BXJ7 453 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 BRPF3Q9ULD4 1205 aa16.37■□□□□ 0.21
HLA-DQB1-202ENST00000399079 LCTP09848 1927 aa16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ADCY6O43306 1168 aa16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 KIF5BP33176 963 aa16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 EEPD1Q7L9B9 569 aa16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 KATNBL1Q9H079 304 aa16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ABHD16BQ9H3Z7 469 aa16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PCDHA1Q9Y5I3 950 aa16.36■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ASB14A6NK59 587 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 OPLAHO14841 1288 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 PGK1P00558 417 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 RARBP10826 455 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 AKR1A1P14550 325 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 ALDH5A1P51649 535 aaPredicted RBP16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CCDC144BQ3MJ40 725 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 CCDC82Q8N4S0 544 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 FANCBQ8NB91 859 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 DPF3Q92784 378 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 C11orf49Q9H6J7 331 aa16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 MRPL11Q9Y3B7 192 aaKnown RBP16.35■□□□□ 0.21
HLA-DQB1-202ENST00000399079 FRMPD3Q5JV73 1810 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms