RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ANKRD13CQ8N6S4 541 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 NSUN7Q8NE18 718 aaKnown RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 GPRC5AQ8NFJ5 357 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 ALG1Q9BT22 464 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 RIOX1Q9H6W3 641 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 ZCCHC17Q9NP64 241 aaKnown RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-206ENST00000399042 PCDHA1Q9Y5I3 950 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 MYPNQ86TC9 1320 aa10.3□□□□□ -0.76
BRCC3-206ENST00000399042 ATAD5Q96QE3 1844 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 TRPA1O75762 1119 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 SCG2P13521 617 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 PDCP20941 246 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 NLRP5P59047 1200 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 MAP2K1Q02750 393 aaPredicted RBP10.29□□□□□ -0.76
BRCC3-206ENST00000399042 SAFBQ15424 915 aaKnown RBP eCLIP10.29□□□□□ -0.76
BRCC3-206ENST00000399042 LARP1BQ659C4 914 aaKnown RBP10.29□□□□□ -0.76
BRCC3-206ENST00000399042 GPKOWQ92917 476 aaPredicted RBP eCLIP10.29□□□□□ -0.76
BRCC3-206ENST00000399042 CUL5Q93034 780 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 INTS4Q96HW7 963 aaKnown RBP10.29□□□□□ -0.76
BRCC3-206ENST00000399042 TEX13BQ9BXU2 312 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 SLC38A10Q9HBR0 1119 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 BRMS1Q9HCU9 246 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 CPA4Q9UI42 421 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 MRPL11Q9Y3B7 192 aaKnown RBP10.29□□□□□ -0.76
BRCC3-206ENST00000399042 RABGAP1Q9Y3P9 1069 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
BRCC3-206ENST00000399042 CA12O43570 354 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 CYTH3O43739 400 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 ICAM1P05362 532 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 CRHR2Q13324 411 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 CUL4AQ13619 759 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 KIF22Q14807 665 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 NTRK3Q16288 839 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 PFKFB3Q16875 520 aaPredicted RBP10.28□□□□□ -0.76
BRCC3-206ENST00000399042 MCTP1Q6DN14 999 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 MCF2L2Q86YR7 1114 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 CCDC148Q8NFR7 591 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 COA7Q96BR5 231 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 C8orf76Q96K31 380 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 AGBL1Q96MI9 1066 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 TRERF1Q96PN7 1200 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 SPATC1LQ9H0A9 340 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 RANBP17Q9H2T7 1088 aaKnown RBP10.28□□□□□ -0.76
BRCC3-206ENST00000399042 C6orf50Q9HD87 102 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 IVNS1ABPQ9Y6Y0 642 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 OTOFQ9HC10 1997 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 ABCB11O95342 1321 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 STK36Q9NRP7 1315 aa10.28□□□□□ -0.76
BRCC3-206ENST00000399042 NID2Q14112 1375 aa10.27□□□□□ -0.76
BRCC3-206ENST00000399042 VPS37CA5D8V6 355 aaPredicted RBP10.27□□□□□ -0.77
BRCC3-206ENST00000399042 hCG_1984214I3L0E3 225 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 CTDNEP1O95476 244 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 SLC25A27O95847 323 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 COPB2P35606 906 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 MRPL12P52815 198 aaKnown RBP10.27□□□□□ -0.77
BRCC3-206ENST00000399042 OAZ1P54368 228 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 ERVK-9P63128 1117 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 ERVK-24P63145 666 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 GUCY1B3Q02153 619 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 TMEM132BQ14DG7 1078 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 TKFCQ3LXA3 575 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 LBX2Q6XYB7 198 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 ANKRD35Q8N283 1001 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 ZNF713Q8N859 430 aaPredicted RBP10.27□□□□□ -0.77
BRCC3-206ENST00000399042 BICD2Q8TD16 824 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 IPO9Q96P70 1041 aaKnown RBP10.27□□□□□ -0.77
BRCC3-206ENST00000399042 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 PSTPIP2Q9H939 334 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 RNF146Q9NTX7 359 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 RNF186Q9NXI6 227 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 VPS54Q9P1Q0 977 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 FBXO40Q9UH90 709 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 GREB1LQ9C091 1923 aaPredicted RBP10.27□□□□□ -0.77
BRCC3-206ENST00000399042 MYH4Q9Y623 1939 aa10.27□□□□□ -0.77
BRCC3-206ENST00000399042 SMCO2A6NFE2 343 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 TLR2O60603 784 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 PEX10O60683 326 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 CFBP00751 764 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 CALML3P27482 149 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 GNA11P29992 359 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 ADCY7P51828 1080 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 FUT2Q10981 343 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 KCTD2Q14681 263 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 WWC2Q6AWC2 1192 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 SMARCC2Q8TAQ2 1214 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 GLT8D2Q9H1C3 349 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 ACAD9Q9H845 621 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 BARHL2Q9NY43 387 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 BTBD7Q9P203 1132 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 RBPJLQ9UBG7 517 aa10.26□□□□□ -0.77
BRCC3-206ENST00000399042 POTEB2H3BUK9 544 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 GCOM1H8Y6P7 765 aaPredicted RBP10.25□□□□□ -0.77
BRCC3-206ENST00000399042 STXBP3O00186 592 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 POLR2MP0CAP2 368 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
BRCC3-206ENST00000399042 ERCC3P19447 782 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms