RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CCDC63Q8NA47 563 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 TRIM6Q9C030 488 aaPredicted RBP16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 ITSN1Q15811 1721 aa16.13■□□□□ 0.17
RPRD1A-202ENST00000399022 PXDNLA1KZ92 1463 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 TRAF5O00463 557 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 MFAP3LO75121 409 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 MMP1P03956 469 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 PTPROQ16827 1216 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 SYCP3Q8IZU3 236 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 EPB41L5Q9HCM4 733 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 MTRF1LQ9UGC7 380 aaKnown RBP16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 GTF2IP78347 998 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 TCP10Q12799 353 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 EYA3Q99504 573 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 CYP27A1Q02318 531 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 RBBP5Q15291 538 aaKnown RBP16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 VSIG1Q86XK7 387 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 TRIM7Q9C029 511 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 BIN2Q9UBW5 565 aaPredicted RBP16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 NR1D1P20393 614 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 SMIM5Q71RC9 77 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 LRWD1Q9UFC0 647 aa16.12■□□□□ 0.17
RPRD1A-202ENST00000399022 ZNF804BA4D1E1 1349 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 TNS3Q68CZ2 1445 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 LIFRP42702 1097 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 DNM2P50570 870 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 GRIPAP1Q4V328 841 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 ERMNQ8TAM6 284 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 SMCO2A6NFE2 343 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 SPDYE3A6NKU9 549 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 TEX33O43247 280 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 EXOSC10Q01780 885 aaKnown RBP16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 RPS6KA1Q15418 735 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 SLC9C1Q4G0N8 1177 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 DAAM2Q86T65 1068 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 EPSTI1Q96J88 318 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 FOXP1Q9H334 677 aaPredicted RBP16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 H3BQF6 201 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 HEXIM1O94992 359 aaKnown RBP16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 ZBTB16Q05516 673 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 TNIP1Q15025 636 aa16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 RBM17Q96I25 401 aaKnown RBP16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 RNF26Q9BY78 433 aaPredicted RBP16.11■□□□□ 0.17
RPRD1A-202ENST00000399022 CCDC160A6NGH7 325 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 APBA1Q02410 837 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 CABP7Q86V35 215 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 HOOK3Q86VS8 718 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 COG1Q8WTW3 980 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 HDAC6Q9UBN7 1215 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 UTP11Q9Y3A2 253 aaKnown RBP16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 KIF1CO43896 1103 aaKnown RBP16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 MRPL44Q9H9J2 332 aaKnown RBP16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 POLD4Q9HCU8 107 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 USP17L8P0C7I0 530 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 CASP1P29466 404 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 DIXDC1Q155Q3 683 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 C6orf163Q5TEZ5 329 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 SNX29Q8TEQ0 813 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 YY1AP1Q9H869 796 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 MYO5BQ9ULV0 1848 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 PLEKHA8P1O95397 391 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 MGARPQ8TDB4 240 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 KRT12Q99456 494 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 TSKSQ9UJT2 592 aa16.1■□□□□ 0.17
RPRD1A-202ENST00000399022 H7C1D1 291 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 PPFIBP2Q8ND30 876 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 UTYO14607 1347 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 TMEM110-MUSTN1A8MSY1 372 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 MTMR3Q13615 1198 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 CCDC38Q502W7 563 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 HIP1RO75146 1068 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 TECP42680 631 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 REXO1L1PQ8IX06 675 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 LRRC47Q8N1G4 583 aaKnown RBP16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 GPR101Q96P66 508 aaPredicted RBP16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 CCDC77Q9BR77 488 aa16.09■□□□□ 0.17
RPRD1A-202ENST00000399022 KCNK3O14649 394 aa16.08■□□□□ 0.17
RPRD1A-202ENST00000399022 CETN2P41208 172 aa16.08■□□□□ 0.17
RPRD1A-202ENST00000399022 STIM2Q9P246 746 aa16.08■□□□□ 0.17
RPRD1A-202ENST00000399022 USP21Q9UK80 565 aa16.08■□□□□ 0.17
RPRD1A-202ENST00000399022 SASH3O75995 380 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 USP14P54578 494 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 TSNAXIP1Q2TAA8 658 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
RPRD1A-202ENST00000399022 HNRNPH1P31943 449 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms