RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 GIMAP8Q8ND71 665 aaPredicted RBP21.87■■□□□ 1.09
COL13A1-205ENST00000398978 PSMB7Q99436 277 aa21.87■■□□□ 1.09
COL13A1-205ENST00000398978 KBTBD4Q9NVX7 518 aa21.87■■□□□ 1.09
COL13A1-205ENST00000398978 COL14A1Q05707 1796 aaKnown RBP21.87■■□□□ 1.09
COL13A1-205ENST00000398978 SCN7AQ01118 1682 aa21.87■■□□□ 1.09
COL13A1-205ENST00000398978 STIM1Q13586 685 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 ZSCAN26Q16670 478 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 SKIDA1Q1XH10 827 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 DLEC1Q9Y238 1755 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 GNPATO15228 680 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 DYMQ7RTS9 669 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 DGKHQ86XP1 1220 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 JAKMIP2Q96AA8 810 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 PYM1Q9BRP8 204 aaKnown RBP21.86■■□□□ 1.09
COL13A1-205ENST00000398978 BARHL2Q9NY43 387 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 CAPN11Q9UMQ6 739 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 PDS5AQ29RF7 1337 aaKnown RBP21.86■■□□□ 1.09
COL13A1-205ENST00000398978 TXLNBQ8N3L3 684 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 RIN2Q8WYP3 895 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-205ENST00000398978 DNAJC7Q99615 494 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 NHEJ1Q9H9Q4 299 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-205ENST00000398978 EXOC1Q9NV70 894 aa21.86■■□□□ 1.09
COL13A1-205ENST00000398978 SMCO2A6NFE2 343 aa21.85■■□□□ 1.09
COL13A1-205ENST00000398978 RHOBTB3O94955 611 aa21.85■■□□□ 1.09
COL13A1-205ENST00000398978 TXKP42681 527 aa21.85■■□□□ 1.09
COL13A1-205ENST00000398978 GPS2Q13227 327 aa21.85■■□□□ 1.09
COL13A1-205ENST00000398978 TRAPPC11Q7Z392 1133 aa21.85■■□□□ 1.09
COL13A1-205ENST00000398978 GJA10Q969M2 543 aa21.85■■□□□ 1.09
COL13A1-205ENST00000398978 NOC4LQ9BVI4 516 aaKnown RBP21.85■■□□□ 1.09
COL13A1-205ENST00000398978 MKRN1Q9UHC7 482 aaKnown RBP21.85■■□□□ 1.09
COL13A1-205ENST00000398978 HNRNPLLQ8WVV9 542 aaKnown RBP21.85■■□□□ 1.09
COL13A1-205ENST00000398978 PLEKHA4Q9H4M7 779 aa21.85■■□□□ 1.09
COL13A1-205ENST00000398978 COL16A1Q07092 1604 aaPredicted RBP21.85■■□□□ 1.09
COL13A1-205ENST00000398978 FLT1P17948 1338 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 CAPN2P17655 700 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 EIF6P56537 245 aaKnown RBP21.84■■□□□ 1.09
COL13A1-205ENST00000398978 RAD51AP2Q09MP3 1159 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 POTEDQ86YR6 584 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 TRIM9Q9C026 710 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 SAR1BQ9Y6B6 198 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 PDE2AO00408 941 aaPredicted RBP21.84■■□□□ 1.09
COL13A1-205ENST00000398978 EPHB6O15197 1021 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 EEF1GP26641 437 aaKnown RBP21.84■■□□□ 1.09
COL13A1-205ENST00000398978 FOXR1Q6PIV2 292 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 CLEC10AQ8IUN9 316 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 CAGE1Q8TC20 777 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 P2RX5Q93086 422 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 THAP9Q9H5L6 903 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 TCP11L1Q9NUJ3 509 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 LCMT1Q9UIC8 334 aa21.84■■□□□ 1.09
COL13A1-205ENST00000398978 RASA1P20936 1047 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 CCDC148Q8NFR7 591 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 PIGSQ96S52 555 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 JADE2Q9NQC1 790 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 FAM207AQ9NSI2 230 aaPredicted RBP21.83■■□□□ 1.09
COL13A1-205ENST00000398978 SMARCAL1Q9NZC9 954 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 FRMPD2Q68DX3 1309 aaPredicted RBP21.83■■□□□ 1.09
COL13A1-205ENST00000398978 OR52Z1P0C646 297 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 SRGNP10124 158 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 FAM193AP78312 1265 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.83■■□□□ 1.09
COL13A1-205ENST00000398978 HAUS4Q9H6D7 363 aa21.83■■□□□ 1.09
COL13A1-205ENST00000398978 POTEB2H3BUK9 544 aa21.83■■□□□ 1.08
COL13A1-205ENST00000398978 ZPR1O75312 459 aa21.83■■□□□ 1.08
COL13A1-205ENST00000398978 DNM2P50570 870 aa21.83■■□□□ 1.08
COL13A1-205ENST00000398978 C2orf54Q08AI8 447 aa21.83■■□□□ 1.08
COL13A1-205ENST00000398978 FKBP15Q5T1M5 1219 aa21.83■■□□□ 1.08
COL13A1-205ENST00000398978 CCSER1Q9C0I3 900 aa21.83■■□□□ 1.08
COL13A1-205ENST00000398978 LRWD1Q9UFC0 647 aa21.83■■□□□ 1.08
COL13A1-205ENST00000398978 MYBL2P10244 700 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 TM4SF1P30408 202 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 KCNB1Q14721 858 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 KIAA0895Q8NCT3 520 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 GLIS3Q8NEA6 775 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 TBCKQ8TEA7 893 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 ANKRD2Q9GZV1 360 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 SH3GLB2Q9NR46 395 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 ZNF263O14978 683 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 SLC10A5Q5PT55 438 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 CCDC155Q8N6L0 562 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 ANKRD13CQ8N6S4 541 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 MYO1AQ9UBC5 1043 aa21.82■■□□□ 1.08
COL13A1-205ENST00000398978 KIAA1551Q9HCM1 1747 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 PALM3A6NDB9 673 aaPredicted RBP21.81■■□□□ 1.08
COL13A1-205ENST00000398978 MATR3P43243 847 aaKnown RBP eCLIP21.81■■□□□ 1.08
COL13A1-205ENST00000398978 LRRC41Q15345 812 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 MIIPQ5JXC2 388 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 SMARCC1Q92922 1105 aaPredicted RBP21.81■■□□□ 1.08
COL13A1-205ENST00000398978 SEMA6BQ9H3T3 888 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 MLXIPQ9HAP2 919 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 LAMB2P55268 1798 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 CASZ1Q86V15 1759 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 PSMD14O00487 310 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 IDEP14735 1019 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 CCNE1P24864 410 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 COA7Q96BR5 231 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 EYA3Q99504 573 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 MMTAG2Q9BU76 263 aaKnown RBP21.81■■□□□ 1.08
COL13A1-205ENST00000398978 TTYH3Q9C0H2 523 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 EHD2Q9NZN4 543 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms