RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 PABPC4Q13310 644 aaKnown RBP eCLIP10.09□□□□□ -0.795e-6■□□□□ 10.8
SEC24A-202ENST00000398844 TCP11X2Q5H9J9 407 aa10.09□□□□□ -0.79
SEC24A-202ENST00000398844 USP49Q70CQ1 688 aa10.09□□□□□ -0.79
SEC24A-202ENST00000398844 PAIP2Q9BPZ3 127 aaKnown RBP10.09□□□□□ -0.79
SEC24A-202ENST00000398844 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
SEC24A-202ENST00000398844 IKBKBO14920 756 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 RAD17O75943 681 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 NTSR2O95665 410 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 HPDP32754 393 aaPredicted RBP10.08□□□□□ -0.8
SEC24A-202ENST00000398844 PDE6BP35913 854 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 CETN1Q12798 172 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 KRT31Q15323 416 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 TUBGCP2Q9BSJ2 902 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 FBXO2Q9UK22 296 aaPredicted RBP10.08□□□□□ -0.8
SEC24A-202ENST00000398844 TTLL1O95922 423 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 ABCB4P21439 1286 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 PRCPP42785 496 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 CASP7P55210 303 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 FAM102BQ5T8I3 360 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 MRRFQ96E11 262 aaKnown RBP10.08□□□□□ -0.8
SEC24A-202ENST00000398844 PCDHA6Q9UN73 950 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 PCDHA8Q9Y5H6 950 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 PCDHA1Q9Y5I3 950 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 BACH1O14867 736 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 SELENOOQ9BVL4 669 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 BRIP1Q9BX63 1249 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 SLFN14P0C7P3 912 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 NCBP1Q09161 790 aaKnown RBP10.08□□□□□ -0.8
SEC24A-202ENST00000398844 PFKFB3Q16875 520 aaPredicted RBP10.08□□□□□ -0.8
SEC24A-202ENST00000398844 ABCB5Q2M3G0 1257 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 HAUS3Q68CZ6 603 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 NSUN4Q96CB9 384 aaKnown RBP10.08□□□□□ -0.8
SEC24A-202ENST00000398844 KIF13AQ9H1H9 1805 aa10.08□□□□□ -0.8
SEC24A-202ENST00000398844 MYOCDQ8IZQ8 938 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 TBC1D22AQ8WUA7 517 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 RPS6KA4O75676 772 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 POTEJP0CG39 1038 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 AOC3Q16853 763 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 SMAP1Q8IYB5 467 aaPredicted RBP10.07□□□□□ -0.8
SEC24A-202ENST00000398844 NARFQ9UHQ1 456 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 ARHGEF35A5YM69 484 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 KLHL30Q0D2K2 578 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 PHLDB2Q86SQ0 1253 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 CNKSR2Q8WXI2 1034 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 TESPA1A2RU30 521 aaPredicted RBP10.07□□□□□ -0.8
SEC24A-202ENST00000398844 SEMA3EO15041 775 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 FBXO11Q86XK2 927 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 U2AF1L4Q8WU68 220 aaKnown RBP10.07□□□□□ -0.8
SEC24A-202ENST00000398844 LARP4BQ92615 738 aaKnown RBP10.07□□□□□ -0.8
SEC24A-202ENST00000398844 CCDC114Q96M63 670 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 CSRNP1Q96S65 589 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 STK32BQ9NY57 414 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 ALAS1P13196 640 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 MAGEA1P43355 309 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 KIAA0753Q2KHM9 967 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 NSMFQ6X4W1 530 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 JDP2Q8WYK2 163 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 DISC1Q9NRI5 854 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
SEC24A-202ENST00000398844 FCER1AP12319 257 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 CTNNA2P26232 953 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 CTTNQ14247 550 aaKnown RBP10.06□□□□□ -0.8
SEC24A-202ENST00000398844 DLGAP5Q15398 846 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 GSPT2Q8IYD1 628 aaKnown RBP10.06□□□□□ -0.8
SEC24A-202ENST00000398844 TRIML1Q8N9V2 468 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 NOX5Q96PH1 765 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 TNFAIP3P21580 790 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 KLK7P49862 253 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 IFI16Q16666 785 aaKnown RBP10.06□□□□□ -0.8
SEC24A-202ENST00000398844 C8orf74Q6P047 294 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 FBXO38Q6PIJ6 1188 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 ST7Q9NRC1 585 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 PTPREP23469 700 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
SEC24A-202ENST00000398844 SLC7A5Q01650 507 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 NFIXQ14938 502 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 IQCB1Q15051 598 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
SEC24A-202ENST00000398844 GSTA5Q7RTV2 222 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 GTPBP4Q9BZE4 634 aaKnown RBP10.06□□□□□ -0.8
SEC24A-202ENST00000398844 NHEJ1Q9H9Q4 299 aaPredicted RBP10.06□□□□□ -0.8
SEC24A-202ENST00000398844 CALCOCO1Q9P1Z2 691 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 TFR2Q9UP52 801 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L15C9J2P7 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L13C9JLJ4 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L11C9JVI0 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L18D6R9N7 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L22D6RA61 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L17D6RBQ6 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L19D6RCP7 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L20D6RJB6 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 CEP104O60308 925 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 CYP27A1Q02318 531 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L24Q0WX57 530 aa10.06□□□□□ -0.8
SEC24A-202ENST00000398844 USP17L6PQ6QN14 398 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms