RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ADCY7P51828 1080 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 GNG11P61952 73 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 TRIM14Q14142 442 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 DCAF8Q5TAQ9 597 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 CREBRFQ8IUR6 639 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 ZNF397Q8NF99 534 aaPredicted RBP15.57■□□□□ 0.08
PRAME-202ENST00000398743 LRRC15Q8TF66 581 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 TEKT1Q969V4 418 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 CCDC47Q96A33 483 aaKnown RBP15.57■□□□□ 0.08
PRAME-202ENST00000398743 MXD3Q9BW11 206 aa15.57■□□□□ 0.08
PRAME-202ENST00000398743 TRIM49BA6NDI0 452 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 URI1O94763 535 aaPredicted RBP15.56■□□□□ 0.08
PRAME-202ENST00000398743 HLA-DOAP06340 250 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 FXR1P51114 621 aaKnown RBP eCLIP15.56■□□□□ 0.088e-8■□□□□ 9
PRAME-202ENST00000398743 MTF1Q14872 753 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 HHIPL2Q6UWX4 724 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 POTEDQ86YR6 584 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 COA7Q96BR5 231 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 FEZ1Q99689 392 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 TMEM260Q9NX78 707 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 CASQ1P31415 396 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 SHMT1P34896 483 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 RAD9BQ6WBX8 426 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 CLEC10AQ8IUN9 316 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 TRIM9Q9C026 710 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 GPCPD1Q9NPB8 672 aa15.56■□□□□ 0.08
PRAME-202ENST00000398743 NRXN2Q9P2S2 1712 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 EEF1GP26641 437 aaKnown RBP15.55■□□□□ 0.08
PRAME-202ENST00000398743 AMPD3Q01432 767 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 ZNF543Q08ER8 600 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 PPP1R18Q6NYC8 613 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 COL23A1Q86Y22 540 aaPredicted RBP15.55■□□□□ 0.08
PRAME-202ENST00000398743 CALML4Q96GE6 196 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 THAP9Q9H5L6 903 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 FECHP22830 423 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 UBXN1Q04323 297 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 CALCRLQ16602 461 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 ERCC6LQ2NKX8 1250 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 APOBEC3HQ6NTF7 200 aaKnown RBP15.55■□□□□ 0.08
PRAME-202ENST00000398743 IRF2BP1Q8IU81 584 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 MASTLQ96GX5 879 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 DHTKD1Q96HY7 919 aaPredicted RBP15.55■□□□□ 0.08
PRAME-202ENST00000398743 TRIM47Q96LD4 638 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 NUP88Q99567 741 aaPredicted RBP15.55■□□□□ 0.08
PRAME-202ENST00000398743 C7orf25Q9BPX7 421 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 GTPBP4Q9BZE4 634 aaKnown RBP15.55■□□□□ 0.08
PRAME-202ENST00000398743 ABHD10Q9NUJ1 306 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 EXOC1Q9NV70 894 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 ADGRG1Q9Y653 693 aa15.55■□□□□ 0.08
PRAME-202ENST00000398743 BRWD3Q6RI45 1802 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 PNMA6FA0A0J9YX94 578 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 MPHOSPH10O00566 681 aaKnown RBP15.54■□□□□ 0.08
PRAME-202ENST00000398743 TXKP42681 527 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 PMS1P54277 932 aaKnown RBP15.54■□□□□ 0.08
PRAME-202ENST00000398743 TMEM266Q2M3C6 531 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 GPATCH4Q5T3I0 446 aaKnown RBP15.54■□□□□ 0.08
PRAME-202ENST00000398743 ADGRF4Q8IZF3 695 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 LRRN4CLQ8ND94 238 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 MNS1Q8NEH6 495 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 MTMR9Q96QG7 549 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 WDR24Q96S15 920 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 MRPL44Q9H9J2 332 aaKnown RBP15.54■□□□□ 0.08
PRAME-202ENST00000398743 JMJD4Q9H9V9 463 aa15.54■□□□□ 0.08
PRAME-202ENST00000398743 PPP1R2P41236 205 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.084e-8■□□□□ 9.7
PRAME-202ENST00000398743 ASIC1P78348 528 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 PDE4DQ08499 809 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 FBXO38Q6PIJ6 1188 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 PODNQ7Z5L7 613 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 TMTC1Q8IUR5 882 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 NOC3LQ8WTT2 800 aaKnown RBP15.53■□□□□ 0.08
PRAME-202ENST00000398743 MMTAG2Q9BU76 263 aaKnown RBP15.53■□□□□ 0.08
PRAME-202ENST00000398743 RAB34Q9BZG1 259 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 EHD4Q9H223 541 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 RIC8AQ9NPQ8 531 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 MAGEC2Q9UBF1 373 aaPredicted RBP15.53■□□□□ 0.08
PRAME-202ENST00000398743 LRWD1Q9UFC0 647 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 MMP10P09238 476 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 CBX1P83916 185 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 TTI2Q6NXR4 508 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 KIFC2Q96AC6 838 aa15.53■□□□□ 0.08
PRAME-202ENST00000398743 BICDL2A1A5D9 508 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 SPDYE4A6NLX3 237 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 LGALS16A8MUM7 142 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 SLC37A4O43826 429 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 TDP2O95551 362 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 CRKP46108 304 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 ATP2B2Q01814 1243 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 NFIAQ12857 509 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 CCDC96Q2M329 555 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 FLAD1Q8NFF5 587 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 LZTFL1Q9NQ48 299 aa15.52■□□□□ 0.08
PRAME-202ENST00000398743 A0A1W2PQC6 194 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 PLSCR1O15162 318 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 CCNE1P24864 410 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 TNNI2P48788 182 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 MAP3K9P80192 1104 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms