RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
PPME1-202ENST00000398427 ZNF214Q9UL59 606 aaPredicted RBP13.17□□□□□ -0.3
PPME1-202ENST00000398427 ZBED4O75132 1171 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 CNMDO75829 334 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 FDX1P10109 184 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 SCG2P13521 617 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
PPME1-202ENST00000398427 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 RAVER2Q9HCJ3 691 aaKnown RBP13.17□□□□□ -0.3
PPME1-202ENST00000398427 TXNRD2Q9NNW7 524 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 PAGR1Q9BTK6 254 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 RBPJLQ9UBG7 517 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 ADGRA2Q96PE1 1338 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 ICAM1P05362 532 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 USH1GQ495M9 461 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
PPME1-202ENST00000398427 MB21D1Q8N884 522 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 COA7Q96BR5 231 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
PPME1-202ENST00000398427 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 GJB4Q9NTQ9 266 aa13.16□□□□□ -0.3
PPME1-202ENST00000398427 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 AMNQ9BXJ7 453 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.15□□□□□ -0.3
PPME1-202ENST00000398427 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 RABGAP1Q9Y3P9 1069 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 CTDP1Q9Y5B0 961 aaPredicted RBP13.15□□□□□ -0.3
PPME1-202ENST00000398427 STXBP3O00186 592 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 ATP2A1O14983 1001 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 FOSBP53539 338 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 OAZ1P54368 228 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 CRHR2Q13324 411 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 CCPG1Q9ULG6 757 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
PPME1-202ENST00000398427 GCLCP48506 637 aaPredicted RBP13.14□□□□□ -0.31
PPME1-202ENST00000398427 PLS1Q14651 629 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 HS1BP3Q53T59 392 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 SNRNP48Q6IEG0 339 aaKnown RBP13.14□□□□□ -0.31
PPME1-202ENST00000398427 ANKRD13CQ8N6S4 541 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
PPME1-202ENST00000398427 WASF1Q92558 559 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 TEX13BQ9BXU2 312 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 CA12O43570 354 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 ALDH1A1P00352 501 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
PPME1-202ENST00000398427 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 ERVK-24P63145 666 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 Q3C1V9 767 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
PPME1-202ENST00000398427 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
PPME1-202ENST00000398427 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 TLR2O60603 784 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 STAT3P40763 770 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 SASS6Q6UVJ0 657 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
PPME1-202ENST00000398427 R3HDMLQ9H3Y0 253 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 MORF4L1Q9UBU8 362 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 RBBP6Q7Z6E9 1792 aaKnown RBP13.13□□□□□ -0.31
PPME1-202ENST00000398427 OPLAHO14841 1288 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 BCRP11274 1271 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 ALAS1P13196 640 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
PPME1-202ENST00000398427 NAPAP54920 295 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 FAM110CQ1W6H9 321 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 DNAJC5GQ8N7S2 189 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 MOV10L1Q9BXT6 1211 aaKnown RBP13.13□□□□□ -0.31
PPME1-202ENST00000398427 HOMER2Q9NSB8 354 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
PPME1-202ENST00000398427 ABCB11O95342 1321 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 CBX1P83916 185 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 GUCY1B3Q02153 619 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 MUM1L1Q5H9M0 696 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 C17orf99Q6UX52 265 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 RIOX2Q8IUF8 465 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 TEX2Q8IWB9 1127 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 RNF186Q9NXI6 227 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 KCNJ14Q9UNX9 436 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
PPME1-202ENST00000398427 KRT40Q6A162 431 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 GPRC5AQ8NFJ5 357 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 PORCNQ9H237 461 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
PPME1-202ENST00000398427 NFIBO00712 420 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms