RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SPATA6Q9NWH7 488 aaPredicted RBP4.45□□□□□ -1.7
CD47-203ENST00000398258 DDX41Q9UJV9 622 aaKnown RBP4.45□□□□□ -1.7
CD47-203ENST00000398258 PRR36Q9H6K5 1346 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 CTSKP43235 329 aa4.44□□□□□ -1.7
CD47-203ENST00000398258 NBPF9Q3BBW0 867 aa4.44□□□□□ -1.7
CD47-203ENST00000398258 SLC43A3Q8NBI5 491 aa4.44□□□□□ -1.7
CD47-203ENST00000398258 RSRP1Q9BUV0 290 aa4.44□□□□□ -1.7
CD47-203ENST00000398258 ZNF747Q9BV97 191 aa4.44□□□□□ -1.7
CD47-203ENST00000398258 DBHP09172 617 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 GJA9P57773 515 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 TMEM62Q0P6H9 643 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 C9orf131Q5VYM1 1079 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 HS2ST1Q7LGA3 356 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 GMLQ99445 158 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 TINF2Q9BSI4 451 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 BCAS3Q9H6U6 928 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 KCNQ5Q9NR82 932 aa4.43□□□□□ -1.7
CD47-203ENST00000398258 A0A1W2PQ45 241 aaPredicted RBP4.42□□□□□ -1.7
CD47-203ENST00000398258 A0A1W2PQY0 241 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 SSU72P8A0A1W2PR75 194 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 IGSF3O75054 1194 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 HTR3BO95264 441 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 PLATP00750 562 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 RLBP1P12271 317 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 LMNB1P20700 586 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 RACK1P63244 317 aaKnown RBP4.42□□□□□ -1.7
CD47-203ENST00000398258 NAALADL2Q58DX5 795 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 NBPF12Q5TAG4 269 aaPredicted RBP4.42□□□□□ -1.7
CD47-203ENST00000398258 LIMS2Q7Z4I7 341 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 PHACTR4Q8IZ21 702 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 ZNF654Q8IZM8 581 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 PHC3Q8NDX5 983 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 DVL3Q92997 716 aaPredicted RBP4.42□□□□□ -1.7
CD47-203ENST00000398258 ASCC2Q9H1I8 757 aaPredicted RBP4.42□□□□□ -1.7
CD47-203ENST00000398258 AP5S1Q9NUS5 200 aa4.42□□□□□ -1.7
CD47-203ENST00000398258 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.42□□□□□ -1.7
CD47-203ENST00000398258 MEIS1O00470 390 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 SIGLEC6O43699 453 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 ZNF205O95201 554 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 F13A1P00488 732 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 ASGR2P07307 311 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 POLR2BP30876 1174 aaKnown RBP4.41□□□□□ -1.7
CD47-203ENST00000398258 GJA8P48165 433 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 PRR5P85299 388 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 PWP1Q13610 501 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 RTP2Q5QGT7 225 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 SREK1Q8WXA9 508 aaKnown RBP4.41□□□□□ -1.7
CD47-203ENST00000398258 GGT7Q9UJ14 662 aa4.41□□□□□ -1.7
CD47-203ENST00000398258 RGS13O14921 159 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 NR1I3Q14994 352 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 TARBP2Q15633 366 aaKnown RBP4.4□□□□□ -1.71
CD47-203ENST00000398258 ZNF394Q53GI3 561 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 USP48Q86UV5 1035 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 ZNF512BQ96KM6 892 aaPredicted RBP4.4□□□□□ -1.71
CD47-203ENST00000398258 RHOVQ96L33 236 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 SYT3Q9BQG1 590 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 CDADC1Q9BWV3 514 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 ACBD3Q9H3P7 528 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 CCSER2Q9H7U1 834 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 COPRSQ9NQ92 184 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
CD47-203ENST00000398258 SRGAP3O43295 1099 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 AMHP03971 560 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 GBP1P32455 592 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 GBP2P32456 591 aaPredicted RBP4.39□□□□□ -1.71
CD47-203ENST00000398258 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
CD47-203ENST00000398258 ICAM4Q14773 271 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 SF3A1Q15459 793 aaKnown RBP4.39□□□□□ -1.71
CD47-203ENST00000398258 PAQR3Q6TCH7 311 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 CRTC3Q6UUV7 619 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 B3GNT8Q7Z7M8 397 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 CCDC84Q86UT8 332 aaPredicted RBP4.39□□□□□ -1.71
CD47-203ENST00000398258 RASGRP4Q8TDF6 673 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 ADAMTS17Q8TE56 1095 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 DRC1Q96MC2 740 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 TMEM74Q96NL1 305 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 VPS11Q9H270 941 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 RXFP1Q9HBX9 757 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 KBTBD4Q9NVX7 518 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 TSC22D4Q9Y3Q8 395 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 PCDHGB7Q9Y5F8 929 aa4.39□□□□□ -1.71
CD47-203ENST00000398258 MINDY4BA8MYZ0 360 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 GREM1O60565 184 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 FZD7O75084 574 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 PF4P02776 101 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 CYBBP04839 570 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 GARTP22102 1010 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 SARSP49591 514 aaKnown RBP4.38□□□□□ -1.71
CD47-203ENST00000398258 FAM160A1Q05DH4 1040 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 CAMK2GQ13555 558 aaPredicted RBP4.38□□□□□ -1.71
CD47-203ENST00000398258 RELL1Q8IUW5 271 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 FBXO27Q8NI29 283 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 ARMC5Q96C12 935 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 RNF38Q9H0F5 515 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 CD248Q9HCU0 757 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 CHST7Q9NS84 486 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 ADAMTS1Q9UHI8 967 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 INVSQ9Y283 1065 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 HS3ST3A1Q9Y663 406 aa4.38□□□□□ -1.71
CD47-203ENST00000398258 LTBP3Q9NS15 1303 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms