RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.18
CCBE1-201ENST00000398179 MCRS1Q96EZ8 462 aa13.96□□□□□ -0.18
CCBE1-201ENST00000398179 VPS16Q9H269 839 aa13.96□□□□□ -0.18
CCBE1-201ENST00000398179 TMEM245Q9H330 911 aa13.96□□□□□ -0.18
CCBE1-201ENST00000398179 CCDC162PA2VCL2 907 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 RGS20O76081 388 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 S100A6P06703 90 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CBX3Q13185 183 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 EIF4A2Q14240 407 aaKnown RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 TWISTNBQ3B726 338 aaPredicted RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 FARSBQ9NSD9 589 aaKnown RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 MORC2Q9Y6X9 1032 aaPredicted RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CALB1P05937 261 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CCT2P78371 535 aaKnown RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 GGNBP2Q9H3C7 697 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 TBC1D2BQ9UPU7 963 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CHKAP35790 457 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 APBA1Q02410 837 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 RFX8Q6ZV50 586 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CNBD2Q96M20 576 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 PDP2Q9P2J9 529 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 MID2Q9UJV3 735 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 ZBTB21Q9ULJ3 1066 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 TTLL13PA6NNM8 815 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 TCF3P15923 654 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 SERPINB1P30740 379 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 NFIAQ12857 509 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 MCF2L2Q86YR7 1114 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 C12orf4Q9NQ89 552 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 ZNF229Q9UJW7 825 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 TCP1P17987 556 aaKnown RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 ROR2Q01974 943 aaKnown RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 SUZ12Q15022 739 aaKnown RBP13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 FSIP1Q8NA03 581 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 CYTH4Q9UIA0 394 aa13.95□□□□□ -0.18
CCBE1-201ENST00000398179 IDH3BO43837 385 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 MCCD1P59942 119 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-201ENST00000398179 KRT83P78385 493 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 TSTA3Q13630 321 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-201ENST00000398179 OASLQ15646 514 aaKnown RBP13.94□□□□□ -0.18
CCBE1-201ENST00000398179 USH1GQ495M9 461 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 MTMR9Q96QG7 549 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 ATP6V1G1O75348 118 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 SEMA3DO95025 777 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 POLGP54098 1239 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-201ENST00000398179 SRGAP1Q7Z6B7 1085 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 CEP19Q96LK0 163 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
CCBE1-201ENST00000398179 SLFNL1Q499Z3 407 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 PRR23BQ6ZRT6 265 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 NUP88Q99567 741 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-201ENST00000398179 SMAD5Q99717 465 aaKnown RBP13.94□□□□□ -0.18
CCBE1-201ENST00000398179 PLCL2Q9UPR0 1127 aa13.94□□□□□ -0.18
CCBE1-201ENST00000398179 CTCFP49711 727 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-201ENST00000398179 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-201ENST00000398179 TTC30AQ86WT1 665 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 CCDC13Q8IYE1 715 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 STIP1P31948 543 aaKnown RBP13.93□□□□□ -0.18
CCBE1-201ENST00000398179 MTHFSP49914 203 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 C3orf20Q8ND61 904 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 ATAD3AQ9NVI7 634 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 MOV10L1Q9BXT6 1211 aaKnown RBP13.93□□□□□ -0.18
CCBE1-201ENST00000398179 COX16Q9P0S2 106 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 TIMM44O43615 452 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 SERPINB3P29508 390 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 DDIT3P35638 169 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 LRRC36Q1X8D7 754 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 CFAP221Q4G0U5 840 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 EZH1Q92800 747 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-201ENST00000398179 KLHL25Q9H0H3 589 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 CSRNP2Q9H175 543 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 PSTPIP2Q9H939 334 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
CCBE1-201ENST00000398179 CNGA2Q16280 664 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 EFCAB2Q5VUJ9 269 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 STKLD1Q8NE28 680 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 DHX38Q92620 1227 aaKnown RBP13.93□□□□□ -0.18
CCBE1-201ENST00000398179 TP53INP1Q96A56 240 aa13.93□□□□□ -0.18
CCBE1-201ENST00000398179 TIPRLO75663 272 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 KIF1BPQ96EK5 621 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 USP40Q9NVE5 1235 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 INTUQ9ULD6 942 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 SPEF1Q9Y4P9 236 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 ATXN3P54252 364 aaPredicted RBP13.92□□□□□ -0.18
CCBE1-201ENST00000398179 BRD9Q9H8M2 597 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 TCP11L1Q9NUJ3 509 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 ZMAT5Q9UDW3 170 aaKnown RBP13.92□□□□□ -0.18
CCBE1-201ENST00000398179 GRXCR2A6NFK2 248 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 RGL2O15211 777 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 RAPGEF3O95398 923 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 TNNC2P02585 160 aa13.92□□□□□ -0.18
CCBE1-201ENST00000398179 TUBB6Q9BUF5 446 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms