RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 TACC1O75410 805 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 FIGNQ5HY92 759 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 EMBQ6PCB8 327 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 CSGALNACT2Q8N6G5 542 aa19.34■□□□□ 0.69
EWSR1-206ENST00000397938 SMCR8Q8TEV9 937 aaPredicted RBP19.34■□□□□ 0.69
EWSR1-206ENST00000397938 SPA17Q15506 151 aa19.33■□□□□ 0.69
EWSR1-206ENST00000397938 ALS2CLQ60I27 953 aa19.33■□□□□ 0.69
EWSR1-206ENST00000397938 TSEN2Q8NCE0 465 aaKnown RBP19.33■□□□□ 0.69
EWSR1-206ENST00000397938 DHTKD1Q96HY7 919 aaPredicted RBP19.33■□□□□ 0.69
EWSR1-206ENST00000397938 SH2D4AQ9H788 454 aa19.33■□□□□ 0.69
EWSR1-206ENST00000397938 RREB1Q92766 1687 aa19.33■□□□□ 0.69
EWSR1-206ENST00000397938 USO1O60763 962 aaKnown RBP19.33■□□□□ 0.68
EWSR1-206ENST00000397938 PFKFB3Q16875 520 aaPredicted RBP19.33■□□□□ 0.68
EWSR1-206ENST00000397938 CCDC96Q2M329 555 aa19.33■□□□□ 0.68
EWSR1-206ENST00000397938 TTMPQ5BVD1 217 aa19.33■□□□□ 0.68
EWSR1-206ENST00000397938 CNOT6LQ96LI5 555 aaKnown RBP19.33■□□□□ 0.68
EWSR1-206ENST00000397938 RABEP2Q9H5N1 569 aa19.33■□□□□ 0.68
EWSR1-206ENST00000397938 CICQ96RK0 1608 aaPredicted RBP19.33■□□□□ 0.68
EWSR1-206ENST00000397938 BAZ2BQ9UIF8 2168 aaKnown RBP19.32■□□□□ 0.68
EWSR1-206ENST00000397938 ATXN2Q99700 1313 aaKnown RBP19.32■□□□□ 0.68
EWSR1-206ENST00000397938 CYP2D7A0A087X1C5 515 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 FGRP09769 529 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 KRT26Q7Z3Y9 468 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 CAVIN3Q969G5 261 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 CCDC42Q96M95 316 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 KBTBD4Q9NVX7 518 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 COL5A2P05997 1499 aaPredicted RBP19.32■□□□□ 0.68
EWSR1-206ENST00000397938 A6NNZ2 444 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 TNFRSF8P28908 595 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 INPP5BP32019 993 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 TUBB8Q3ZCM7 444 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 HAUS3Q68CZ6 603 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 ARL8AQ96BM9 186 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 PCMTD1Q96MG8 357 aaPredicted RBP19.32■□□□□ 0.68
EWSR1-206ENST00000397938 ERGIC2Q96RQ1 377 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 OSBPL9Q96SU4 736 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 STIM2Q9P246 746 aa19.32■□□□□ 0.68
EWSR1-206ENST00000397938 VEGFAP15692 232 aaPredicted RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 TCP1P17987 556 aaKnown RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 SLC7A5Q01650 507 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 MIIPQ5JXC2 388 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 MYCBPQ99417 103 aaPredicted RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 RIOK1Q9BRS2 568 aaKnown RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 MLXIPQ9HAP2 919 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 HYOU1Q9Y4L1 999 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 PP2D1A8MPX8 630 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 HSF2BPO75031 334 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 TTC19Q6DKK2 380 aaPredicted RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 KCNV1Q6PIU1 500 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 FAM114A1Q8IWE2 563 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 ZSCAN29Q8IWY8 852 aaPredicted RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 RASSF8Q8NHQ8 419 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 P2RX5Q93086 422 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 RUFY1Q96T51 708 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 IFIH1Q9BYX4 1025 aaKnown RBP19.31■□□□□ 0.68
EWSR1-206ENST00000397938 SLIT2O94813 1529 aa19.31■□□□□ 0.68
EWSR1-206ENST00000397938 FAM205AQ6ZU69 1335 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 PLEKP08567 350 aaPredicted RBP19.3■□□□□ 0.68
EWSR1-206ENST00000397938 CCNE1P24864 410 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 CALML3P27482 149 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 HNRNPH3P31942 346 aaKnown RBP19.3■□□□□ 0.68
EWSR1-206ENST00000397938 HNRNPH1P31943 449 aaKnown RBP19.3■□□□□ 0.68
EWSR1-206ENST00000397938 DTHD1Q6ZMT9 781 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 PIGBQ92521 554 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 PCDHA13Q9Y5I0 950 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 BICDL2A1A5D9 508 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 MOCS3O95396 460 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 MTIF2P46199 727 aaKnown RBP19.3■□□□□ 0.68
EWSR1-206ENST00000397938 MRPS25P82663 173 aaKnown RBP19.3■□□□□ 0.68
EWSR1-206ENST00000397938 FBXW10Q5XX13 1052 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 NFRKBQ6P4R8 1299 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 BLIDQ8IZY5 108 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 IQCDQ96DY2 449 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 NOC4LQ9BVI4 516 aaKnown RBP19.3■□□□□ 0.68
EWSR1-206ENST00000397938 BRIP1Q9BX63 1249 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 PRDM11Q9NQV5 511 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 SAMM50Q9Y512 469 aa19.3■□□□□ 0.68
EWSR1-206ENST00000397938 MATR3P43243 847 aaKnown RBP eCLIP19.29■□□□□ 0.68
EWSR1-206ENST00000397938 CNPY4Q8N129 248 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 EEF2KMTQ96G04 330 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 CARD10Q9BWT7 1032 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 PLAGL2Q9UPG8 496 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 MYH10P35580 1976 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 CACNA1SQ13698 1873 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 NNTQ13423 1086 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 ANKRD40Q6AI12 368 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 CCSER1Q9C0I3 900 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 ARHGAP20Q9P2F6 1191 aa19.29■□□□□ 0.68
EWSR1-206ENST00000397938 LCA5LO95447 670 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 DCCP43146 1447 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 PDCLQ13371 301 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 CCDC181Q5TID7 509 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 TYW1BQ6NUM6 668 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 B4GALNT4Q76KP1 1039 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 ZNF34Q8IZ26 560 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 LRRC15Q8TF66 581 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 ALS2CR12Q96Q35 445 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 SMARCAL1Q9NZC9 954 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 ABCF2Q9UG63 623 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms