RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 USH1GQ495M9 461 aa22.05■■□□□ 1.12
PDLIM2-204ENST00000397760 ANO1Q5XXA6 986 aa22.05■■□□□ 1.12
PDLIM2-204ENST00000397760 CCDC174Q6PII3 467 aa22.05■■□□□ 1.12
PDLIM2-204ENST00000397760 PIK3AP1Q6ZUJ8 805 aa22.05■■□□□ 1.12
PDLIM2-204ENST00000397760 USP25Q9UHP3 1055 aa22.05■■□□□ 1.12
PDLIM2-204ENST00000397760 PHIPQ8WWQ0 1821 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 UNCXA6NJT0 531 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 CELF2O95319 508 aaKnown RBP22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 FKBP1BP68106 108 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 OPTNQ96CV9 577 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 SLC10A4Q96EP9 437 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 NUP62CLQ9H1M0 184 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 GBA2Q9HCG7 927 aaPredicted RBP22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 RIC8AQ9NPQ8 531 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 PPP1R9AQ9ULJ8 1098 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 OTOFQ9HC10 1997 aa22.04■■□□□ 1.12
PDLIM2-204ENST00000397760 CXCL11O14625 94 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 TRAF1Q13077 416 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 RBM43Q6ZSC3 357 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 LINC00301Q8NCQ3 95 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 PSTPIP2Q9H939 334 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 CCDC194A0A1B0GVG4 234 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 YEATS4O95619 227 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 ATP2B1P20020 1258 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 MRPL12P52815 198 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 PPIL2Q13356 520 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 SF3A1Q15459 793 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 REXO1Q8N1G1 1221 aaKnown RBP22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 C2orf69Q8N8R5 385 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 CUL5Q93034 780 aa22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 BIN2Q9UBW5 565 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-204ENST00000397760 GOLGA6L4A6NEF3 574 aa22.02■■□□□ 1.12
PDLIM2-204ENST00000397760 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-204ENST00000397760 STK38Q15208 465 aa22.02■■□□□ 1.12
PDLIM2-204ENST00000397760 CATSPERGQ6ZRH7 1159 aa22.02■■□□□ 1.12
PDLIM2-204ENST00000397760 GLT8D2Q9H1C3 349 aa22.02■■□□□ 1.12
PDLIM2-204ENST00000397760 A0A0G2JLL6 359 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L15C9J2P7 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L13C9JLJ4 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L11C9JVI0 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L18D6R9N7 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L22D6RA61 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L17D6RBQ6 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L19D6RCP7 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L20D6RJB6 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 TAL1P17542 331 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L24Q0WX57 530 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 TPRNQ4KMQ1 711 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 KRT25Q7Z3Z0 450 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 PRRT2Q7Z6L0 340 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 FAM200AQ8TCP9 573 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 KCNH4Q9UQ05 1017 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 CAVIN2O95810 425 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 JAKMIP3Q5VZ66 844 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 SLC38A10Q9HBR0 1119 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 PCDHB6Q9Y5E3 794 aa22.01■■□□□ 1.11
PDLIM2-204ENST00000397760 SPTLC2O15270 562 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 ZBED4O75132 1171 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 TRAPPC10P48553 1259 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 COG2Q14746 738 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 SLC39A14Q15043 492 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 UBE2SQ16763 222 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 GADL1Q6ZQY3 521 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 KCNG4Q8TDN1 519 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 ATG4CQ96DT6 458 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 GPBP1L1Q9HC44 474 aaPredicted RBP22■■□□□ 1.11
PDLIM2-204ENST00000397760 TMEM260Q9NX78 707 aa22■■□□□ 1.11
PDLIM2-204ENST00000397760 CTDP1Q9Y5B0 961 aaPredicted RBP22■■□□□ 1.11
PDLIM2-204ENST00000397760 ICAM1P05362 532 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 FDX1P10109 184 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 DSG3P32926 999 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 NONOQ15233 471 aaKnown RBP eCLIP21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 PTPAQ15257 358 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 TREML2Q5T2D2 321 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 PROCA1Q8NCQ7 364 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 ZNF536O15090 1300 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 VWA5AO00534 786 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 GJA5P36382 358 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 CLK2P49760 499 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 INF2Q27J81 1249 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 TTC38Q5R3I4 469 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 CST9Q5W186 159 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 PGBD1Q96JS3 809 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 AGBL1Q96MI9 1066 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 CLSTN2Q9H4D0 955 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 CCPG1Q9ULG6 757 aa21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 MRPL11Q9Y3B7 192 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-204ENST00000397760 MYH15Q9Y2K3 1946 aa21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 GOLGA6L6A8MZA4 724 aa21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 ME1P48163 572 aa21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 CPXCR1Q8N123 301 aa21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 TNMDQ9H2S6 317 aa21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 RAVER2Q9HCJ3 691 aaKnown RBP21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 HOXC10Q9NYD6 342 aa21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 CEP131Q9UPN4 1083 aa21.98■■□□□ 1.11
PDLIM2-204ENST00000397760 WNT7AO00755 349 aa21.97■■□□□ 1.11
PDLIM2-204ENST00000397760 LIG1P18858 919 aa21.97■■□□□ 1.11
PDLIM2-204ENST00000397760 HSP90AA2PQ14568 343 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-204ENST00000397760 USP17L6PQ6QN14 398 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms