RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 RSPH3Q86UC2 560 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
LSS-202ENST00000397728 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 ZBTB5O15062 677 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 DMP1Q13316 513 aaPredicted RBP17.1■□□□□ 0.33
LSS-202ENST00000397728 PKP1Q13835 747 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 ZNF830Q96NB3 372 aaPredicted RBP17.1■□□□□ 0.33
LSS-202ENST00000397728 FLT1P17948 1338 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 KIF5AQ12840 1032 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 ALX1Q15699 326 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 TRMT44Q8IYL2 757 aaKnown RBP17.09■□□□□ 0.33
LSS-202ENST00000397728 SYMPKQ92797 1274 aaKnown RBP17.09■□□□□ 0.33
LSS-202ENST00000397728 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 ZEB2O60315 1214 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 FASTKD5Q7L8L6 764 aaKnown RBP17.09■□□□□ 0.33
LSS-202ENST00000397728 NEDD1Q8NHV4 660 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 NELFBQ8WX92 580 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 PALM3A6NDB9 673 aaPredicted RBP17.09■□□□□ 0.33
LSS-202ENST00000397728 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
LSS-202ENST00000397728 MTMR2Q13614 643 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 ODR4Q5SWX8 454 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 MIS18BP1Q6P0N0 1132 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 INO80B-WBP1J3KQ70 363 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
LSS-202ENST00000397728 MMP1P03956 469 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 HLTFQ14527 1009 aaKnown RBP eCLIP17.09■□□□□ 0.33
LSS-202ENST00000397728 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.09■□□□□ 0.33
LSS-202ENST00000397728 INO80BQ9C086 356 aaPredicted RBP17.09■□□□□ 0.33
LSS-202ENST00000397728 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
LSS-202ENST00000397728 ENTPD3O75355 529 aa17.08■□□□□ 0.33
LSS-202ENST00000397728 RASSF7Q02833 373 aa17.08■□□□□ 0.33
LSS-202ENST00000397728 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.33
LSS-202ENST00000397728 AGBL3Q8NEM8 1001 aa17.08■□□□□ 0.33
LSS-202ENST00000397728 KIFAP3Q92845 792 aa17.08■□□□□ 0.33
LSS-202ENST00000397728 FAM151AQ8WW52 585 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 TRERF1Q96PN7 1200 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 APOL6Q9BWW8 343 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 PANK4Q9NVE7 773 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 GBP2P32456 591 aaPredicted RBP17.08■□□□□ 0.32
LSS-202ENST00000397728 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
LSS-202ENST00000397728 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 ANKFY1Q9P2R3 1169 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 LARGE1O95461 756 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 GPIHBP1Q8IV16 184 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.32
LSS-202ENST00000397728 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
LSS-202ENST00000397728 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 TAB2Q9NYJ8 693 aa17.08■□□□□ 0.32
LSS-202ENST00000397728 ARHGEF28Q8N1W1 1705 aaKnown RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 CDC25AP30304 524 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 STAT3P40763 770 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 LMAN1P49257 510 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 SMC1AQ14683 1233 aaKnown RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 USP17L6PQ6QN14 398 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 RETREG2Q8NC44 543 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 H0YCG3 227 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 CHGBP05060 677 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 KRT9P35527 623 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 KRT83P78385 493 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 PLCB3Q01970 1234 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 JPH2Q9BR39 696 aaPredicted RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 FAM26FQ5R3K3 315 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 FMNL3Q8IVF7 1028 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 NAA15Q9BXJ9 866 aaKnown RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 SRRTQ9BXP5 876 aaKnown RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 ZNF215Q9UL58 517 aaPredicted RBP17.07■□□□□ 0.32
LSS-202ENST00000397728 MEIS1O00470 390 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 CMA1P23946 247 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 CSRNP2Q9H175 543 aa17.07■□□□□ 0.32
LSS-202ENST00000397728 MARK3P27448 753 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 YARSP54577 528 aaKnown RBP17.06■□□□□ 0.32
LSS-202ENST00000397728 MTERF2Q49AM1 385 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 CLEC10AQ8IUN9 316 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 CCDC117Q8IWD4 279 aaPredicted RBP17.06■□□□□ 0.32
LSS-202ENST00000397728 IGSF22Q8N9C0 903 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 LAD1O00515 517 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 TNPO2O14787 897 aaKnown RBP17.06■□□□□ 0.32
LSS-202ENST00000397728 TACC1O75410 805 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 NR1I2O75469 434 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms