RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PNMA6FA0A0J9YX94 578 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 GOLGA6L4A6NEF3 574 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 PDHXO00330 501 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 FDX1P10109 184 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 SCG2P13521 617 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 SNAP25P60880 206 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 NOGQ13253 232 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
CAPN3-207ENST00000397200 QRICH1Q2TAL8 776 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 ATG4CQ96DT6 458 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 ALG1Q9BT22 464 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 POLR3EQ9NVU0 708 aa17.08■□□□□ 0.32
CAPN3-207ENST00000397200 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.32
CAPN3-207ENST00000397200 SPDYE16A6NNV3 312 aaPredicted RBP17.07■□□□□ 0.32
CAPN3-207ENST00000397200 ZBED4O75132 1171 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 YEATS4O95619 227 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 PKN1Q16512 942 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 MYSM1Q5VVJ2 828 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 P2RX7Q99572 595 aaKnown RBP17.07■□□□□ 0.32
CAPN3-207ENST00000397200 PTPN18Q99952 460 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 FTOQ9C0B1 505 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAPN3-207ENST00000397200 DACT1Q9NYF0 836 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 VWA5AO00534 786 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 HTRA3P83110 453 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 HS1BP3Q53T59 392 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 HEATR3Q7Z4Q2 680 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
CAPN3-207ENST00000397200 A0A0G2JMZ2 1700 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 hCG_1984214I3L0E3 225 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 AOC2O75106 756 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 HERVK_113P62684 666 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 OTUD7BQ6GQQ9 843 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 ZNF713Q8N859 430 aaPredicted RBP17.06■□□□□ 0.32
CAPN3-207ENST00000397200 RNF214Q8ND24 703 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 BICD2Q8TD16 824 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 GPKOWQ92917 476 aaPredicted RBP eCLIP17.06■□□□□ 0.32
CAPN3-207ENST00000397200 AIFM3Q96NN9 605 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 AMNQ9BXJ7 453 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 ADAMTS5Q9UNA0 930 aa17.06■□□□□ 0.32
CAPN3-207ENST00000397200 A0A1W2PQ27 194 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 A0A1W2PQ64 194 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 A0A1W2PQD8 194 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
CAPN3-207ENST00000397200 NR1I2O75469 434 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 CCDC192P0DO97 292 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 XBP1P17861 261 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 TRAF1Q13077 416 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 TRIM29Q14134 588 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 KRT40Q6A162 431 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 WWC2Q6AWC2 1192 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 LBX2Q6XYB7 198 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 IFNL1Q8IU54 200 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 LINC00301Q8NCQ3 95 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 SMCR8Q8TEV9 937 aaPredicted RBP17.05■□□□□ 0.32
CAPN3-207ENST00000397200 ZIC5Q96T25 663 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 PARK7Q99497 189 aaKnown RBP17.05■□□□□ 0.32
CAPN3-207ENST00000397200 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
CAPN3-207ENST00000397200 GJB4Q9NTQ9 266 aa17.05■□□□□ 0.32
CAPN3-207ENST00000397200 PPP1R11O60927 126 aaPredicted RBP17.04■□□□□ 0.32
CAPN3-207ENST00000397200 ICAM1P05362 532 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 CYP2C8P10632 490 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 U2AF2P26368 475 aaKnown RBP eCLIP17.04■□□□□ 0.32
CAPN3-207ENST00000397200 TM4SF4P48230 202 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 USH1GQ495M9 461 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
CAPN3-207ENST00000397200 ENGASEQ8NFI3 743 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 KCNG4Q8TDN1 519 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 GTF3C2Q8WUA4 911 aaPredicted RBP17.04■□□□□ 0.32
CAPN3-207ENST00000397200 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
CAPN3-207ENST00000397200 TNMDQ9H2S6 317 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 RRAGDQ9NQL2 400 aaPredicted RBP17.04■□□□□ 0.32
CAPN3-207ENST00000397200 BARHL2Q9NY43 387 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 PCDHA1Q9Y5I3 950 aa17.04■□□□□ 0.32
CAPN3-207ENST00000397200 HSPA6P17066 643 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 OAZ1P54368 228 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 CPXCR1Q8N123 301 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 REPS2Q8NFH8 660 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 CCDC12Q8WUD4 166 aaPredicted RBP17.03■□□□□ 0.32
CAPN3-207ENST00000397200 COA7Q96BR5 231 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 RAVER2Q9HCJ3 691 aaKnown RBP17.03■□□□□ 0.32
CAPN3-207ENST00000397200 SH3GLB2Q9NR46 395 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 VPS54Q9P1Q0 977 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 CCPG1Q9ULG6 757 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 ZNF536O15090 1300 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 STXBP3O00186 592 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 VEGFBP49765 207 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 NAPAP54920 295 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 SNW1Q13573 536 aaKnown RBP17.03■□□□□ 0.32
CAPN3-207ENST00000397200 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
CAPN3-207ENST00000397200 TPRNQ4KMQ1 711 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 ADALQ6DHV7 355 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 CCDC148Q8NFR7 591 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 AGBL1Q96MI9 1066 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms