RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SIPA1L1O43166 1804 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 RHOBTB3O94955 611 aa18.65■□□□□ 0.58
TRIM39-205ENST00000396551 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
TRIM39-205ENST00000396551 CGNQ9P2M7 1197 aaKnown RBP18.65■□□□□ 0.58
TRIM39-205ENST00000396551 N4BP3O15049 544 aa18.64■□□□□ 0.58
TRIM39-205ENST00000396551 APOBEC3HQ6NTF7 200 aaKnown RBP18.64■□□□□ 0.58
TRIM39-205ENST00000396551 MRPL44Q9H9J2 332 aaKnown RBP18.64■□□□□ 0.58
TRIM39-205ENST00000396551 MYL1P05976 194 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 TECP42680 631 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 SPAG1Q07617 926 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 C10orf71Q711Q0 1435 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 hCG_1984214I3L0E3 225 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 ZNF713Q8N859 430 aaPredicted RBP18.64■□□□□ 0.57
TRIM39-205ENST00000396551 GIMAP8Q8ND71 665 aaPredicted RBP18.64■□□□□ 0.57
TRIM39-205ENST00000396551 WDR24Q96S15 920 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 KCNQ5Q9NR82 932 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
TRIM39-205ENST00000396551 RNF225M0QZC1 329 aaPredicted RBP18.63■□□□□ 0.57
TRIM39-205ENST00000396551 TTLL1O95922 423 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 ZNF543Q08ER8 600 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 NFIAQ12857 509 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 HHIPL2Q6UWX4 724 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 CUEDC2Q9H467 287 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 SWAP70Q9UH65 585 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 ZNF646O15015 1829 aaPredicted RBP18.63■□□□□ 0.57
TRIM39-205ENST00000396551 MYO3BQ8WXR4 1341 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 GOLGA6L9A6NEM1 432 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 PPP1R11O60927 126 aaPredicted RBP18.63■□□□□ 0.57
TRIM39-205ENST00000396551 ALDH1B1P30837 517 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 JMJD4Q9H9V9 463 aa18.63■□□□□ 0.57
TRIM39-205ENST00000396551 H7C1D1 291 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 FECHP22830 423 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 TTBK2Q6IQ55 1244 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 ZFPM1Q8IX07 1006 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 MTMR9Q96QG7 549 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 ADCY7P51828 1080 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 NAA15Q9BXJ9 866 aaKnown RBP18.62■□□□□ 0.57
TRIM39-205ENST00000396551 TRIM9Q9C026 710 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 MAGEF1Q9HAY2 307 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 PCDHAC2Q9Y5I4 1007 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 ADGRG1Q9Y653 693 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 SCN9AQ15858 1988 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 A0A0U1RQJ8 604 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 MMP10P09238 476 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 ORC2Q13416 577 aaPredicted RBP18.62■□□□□ 0.57
TRIM39-205ENST00000396551 ADGRF4Q8IZF3 695 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 ATRIPQ8WXE1 791 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 TEKT1Q969V4 418 aa18.62■□□□□ 0.57
TRIM39-205ENST00000396551 SLC37A4O43826 429 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 URI1O94763 535 aaPredicted RBP18.61■□□□□ 0.57
TRIM39-205ENST00000396551 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 DBNDD1Q9H9R9 158 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 TDP2O95551 362 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 PDE6BP35913 854 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 TXKP42681 527 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 GNG11P61952 73 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 TTI2Q6NXR4 508 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 CNGA4Q8IV77 575 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 KIFC2Q96AC6 838 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 MASTLQ96GX5 879 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 ZNF397Q8NF99 534 aaPredicted RBP18.61■□□□□ 0.57
TRIM39-205ENST00000396551 C7orf25Q9BPX7 421 aa18.61■□□□□ 0.57
TRIM39-205ENST00000396551 MYH7BA7E2Y1 1941 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 SPDYE4A6NLX3 237 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 CRKP46108 304 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 FBXO38Q6PIJ6 1188 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 PNMA6FA0A0J9YX94 578 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 CCDC175P0C221 793 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 GRB10Q13322 594 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 ANKRD20A12PQ8NF67 263 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 CCDC51Q96ER9 411 aa18.6■□□□□ 0.57
TRIM39-205ENST00000396551 DUSP9Q99956 384 aaKnown RBP18.6■□□□□ 0.57
TRIM39-205ENST00000396551 SLC16A2P36021 539 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 ERVK-24P63145 666 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 CBX1P83916 185 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 CALCRLQ16602 461 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 UBE2SQ16763 222 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 SRRTQ9BXP5 876 aaKnown RBP18.59■□□□□ 0.57
TRIM39-205ENST00000396551 IRX2Q9BZI1 471 aaPredicted RBP18.59■□□□□ 0.57
TRIM39-205ENST00000396551 ABHD10Q9NUJ1 306 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 MPHOSPH10O00566 681 aaKnown RBP18.59■□□□□ 0.57
TRIM39-205ENST00000396551 CASQ1P31415 396 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 PDE4DQ08499 809 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 STK4Q13043 487 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 SHROOM1Q2M3G4 852 aaPredicted RBP18.59■□□□□ 0.57
TRIM39-205ENST00000396551 PNMA5Q96PV4 448 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 THAP9Q9H5L6 903 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 ARFGEF1Q9Y6D6 1849 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 G3V3G9 751 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 PSMA7O14818 248 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 CLK2P49760 499 aaKnown RBP18.59■□□□□ 0.57
TRIM39-205ENST00000396551 CACNB3P54284 484 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 UBXN1Q04323 297 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 MSL1Q68DK7 614 aa18.59■□□□□ 0.57
TRIM39-205ENST00000396551 KCTD1Q719H9 257 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms