RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 CALML3P27482 149 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 METAP2P50579 478 aaKnown RBP eCLIP11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 RTN1Q16799 776 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 PRAMEF19Q5SWL8 479 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 BTNL9Q6UXG8 535 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 PHKBQ93100 1093 aa11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 UPF2Q9HAU5 1272 aaKnown RBP11.73□□□□□ -0.53
THUMPD1-202ENST00000396083 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 ICAM1P05362 532 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 KIF5BP33176 963 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 AK2P54819 239 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 EEPD1Q7L9B9 569 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 GPKOWQ92917 476 aaPredicted RBP eCLIP11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 MROH8Q9H579 483 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 A0A0G2JMZ2 1700 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 DDAH1O94760 285 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 SLC25A27O95847 323 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 NT5C2P49902 561 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 MAP2K5Q13163 448 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 ACAD9Q9H845 621 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
THUMPD1-202ENST00000396083 CFBP00751 764 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 INHAP05111 366 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 CNGA1P29973 690 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 RGS2P41220 211 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 GRB14Q14449 540 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 MORN1Q5T089 497 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 FBXO11Q86XK2 927 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
THUMPD1-202ENST00000396083 ZBTB5O15062 677 aa11.71□□□□□ -0.54
THUMPD1-202ENST00000396083 HOXA13P31271 388 aaPredicted RBP11.71□□□□□ -0.54
THUMPD1-202ENST00000396083 BAATQ14032 418 aaPredicted RBP11.71□□□□□ -0.54
THUMPD1-202ENST00000396083 SLC30A10Q6XR72 485 aa11.71□□□□□ -0.54
THUMPD1-202ENST00000396083 RNF208Q9H0X6 261 aa11.71□□□□□ -0.54
THUMPD1-202ENST00000396083 TPCN1Q9ULQ1 816 aa11.71□□□□□ -0.54
THUMPD1-202ENST00000396083 V9GY48 417 aaPredicted RBP11.71□□□□□ -0.54
THUMPD1-202ENST00000396083 PLA2G6O60733 806 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 LARGE1O95461 756 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 PDIA3P30101 505 aaKnown RBP11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 SOCS4Q8WXH5 440 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 KIF2CQ99661 725 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 EPB41L2O43491 1005 aaKnown RBP11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 STRNO43815 780 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 UBXN2AP68543 259 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 TMTC3Q6ZXV5 915 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 APBA2Q99767 749 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 AMNQ9BXJ7 453 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
THUMPD1-202ENST00000396083 SLC15A5A6NIM6 579 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 ATP2A1O14983 1001 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 GNRH1P01148 92 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 CALM1P0DP23 149 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 CALM2P0DP24 149 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 CALM3P0DP25 149 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 PTGS1P23219 599 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 ANAPC15P60006 121 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 FCHSD1Q86WN1 690 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 SHCBP1Q8NEM2 672 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 POTEB2H3BUK9 544 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 OAZ1P54368 228 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 RNF207Q6ZRF8 634 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 CLEC4DQ8WXI8 215 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 LENG1Q96BZ8 264 aaPredicted RBP11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 MAML3Q96JK9 1138 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
THUMPD1-202ENST00000396083 WDR19Q8NEZ3 1342 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 CPLX1O14810 134 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 FDX1P10109 184 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 CCND3P30281 292 aaPredicted RBP11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 FOSBP53539 338 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 CACNB2Q08289 660 aaPredicted RBP11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 USP6NLQ92738 828 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 SLC26A6Q9BXS9 759 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 ZNF333Q96JL9 665 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 AGXT2Q9BYV1 514 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 ASTN1O14525 1302 aa11.68□□□□□ -0.54
THUMPD1-202ENST00000396083 PNMA6FA0A0J9YX94 578 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 OPLAHO14841 1288 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 HMGCRP04035 888 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 SCRN1Q12765 414 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms