RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 CCDC197Q8NCU1 140 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 BATF3Q9NR55 127 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 GDAQ9Y2T3 454 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 SPHKAPQ2M3C7 1700 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 UBR1Q8IWV7 1749 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 TARSL2A2RTX5 802 aaKnown RBP8.13□□□□□ -1.11
BDNF-207ENST00000395986 KCNJ18B7U540 433 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 MGRN1O60291 552 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 OATP04181 439 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 FUT4P22083 530 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 PRPHP41219 470 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 RASSF7Q02833 373 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 DHX9Q08211 1270 aaKnown RBP8.13□□□□□ -1.11
BDNF-207ENST00000395986 KCNJ12Q14500 433 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 C1QTNF12Q5T7M4 302 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 ALS2CLQ60I27 953 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 ISLR2Q6UXK2 745 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 CREG2Q8IUH2 290 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 MAB21L3Q8N8X9 362 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 ACSBG1Q96GR2 724 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 OSBPL9Q96SU4 736 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 DDX50Q9BQ39 737 aaKnown RBP8.13□□□□□ -1.11
BDNF-207ENST00000395986 AP1M1Q9BXS5 423 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 SUDS3Q9H7L9 328 aaPredicted RBP8.13□□□□□ -1.11
BDNF-207ENST00000395986 FAM207AQ9NSI2 230 aaPredicted RBP8.13□□□□□ -1.11
BDNF-207ENST00000395986 NPHP3-ACAD11A0A0J9YXS1 232 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 CAPN15O75808 1086 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 RNF8O76064 485 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 UBOX5O94941 541 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 METAP2P50579 478 aaKnown RBP eCLIP8.13□□□□□ -1.11
BDNF-207ENST00000395986 ICA1Q05084 483 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 TDRD12Q587J7 1177 aaKnown RBP8.13□□□□□ -1.11
BDNF-207ENST00000395986 PTF1AQ7RTS3 328 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 IFT20Q8IY31 132 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 CNBD1Q8NA66 436 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 MTFR1LQ9H019 292 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 MMADHCQ9H3L0 296 aaPredicted RBP8.13□□□□□ -1.11
BDNF-207ENST00000395986 PNMA2Q9UL42 364 aa8.13□□□□□ -1.11
BDNF-207ENST00000395986 PSMD14O00487 310 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 PFDN1O60925 122 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 TACC1O75410 805 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 HSPD1P10809 573 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 ABCD1P33897 745 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ITGB3BPQ13352 177 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 CUL3Q13618 768 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 C2CD5Q86YS7 1000 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ANKS4BQ8N8V4 417 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 IFIH1Q9BYX4 1025 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 NHEJ1Q9H9Q4 299 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 NLRC4Q9NPP4 1024 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 ERICH2A1L162 156 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 MORC3Q14149 939 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 GALNT17Q6IS24 598 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 EMBQ6PCB8 327 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 C6orf89Q6UWU4 347 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 FAM81AQ8TBF8 368 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 NAF1Q96HR8 494 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 SYT15Q9BQS2 421 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 METTL5Q9NRN9 209 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 PNMA3Q9UL41 463 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 TRPM2O94759 1503 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ADGRL3Q9HAR2 1447 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 CCT8L1PA6NM43 557 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 KRT16P08779 473 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ATP2A2P16615 1042 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 GUCY1A2P33402 732 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 IARSP41252 1262 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 RAD23BP54727 409 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 EHHADHQ08426 723 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 DNAJC14Q6Y2X3 702 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 OTUD6AQ7L8S5 288 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 YTHDF3Q7Z739 585 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 ELOA2Q8IYF1 753 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 CASKIN2Q8WXE0 1202 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ALS2CR12Q96Q35 445 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ECT2Q9H8V3 914 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.12□□□□□ -1.11
BDNF-207ENST00000395986 SAMD15Q9P1V8 674 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 HPSEQ9Y251 543 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ATP5J2-PTCD1G3V325 749 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 PTCD1O75127 700 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 ZNF189O75820 626 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 FMNL1O95466 1100 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 HMGB1P09429 215 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 CYLC1P35663 651 aaPredicted RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 KRT83P78385 493 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 ZBED6P86452 979 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 XRCC4Q13426 336 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 PLCB4Q15147 1175 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 RFX8Q6ZV50 586 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 DIS3L2Q8IYB7 885 aaKnown RBP8.12□□□□□ -1.11
BDNF-207ENST00000395986 ARFGAP2Q8N6H7 521 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 IL17REQ8NFR9 667 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 NELFBQ8WX92 580 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 CTAGE1Q96RT6 745 aa8.12□□□□□ -1.11
BDNF-207ENST00000395986 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms