RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 MXRA7P84157 204 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 RCN1Q15293 331 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 RBM43Q6ZSC3 357 aaKnown RBP9.88□□□□□ -0.83
MSH5-205ENST00000395853 NCCRP1Q6ZVX7 275 aaPredicted RBP9.88□□□□□ -0.83
MSH5-205ENST00000395853 NACC2Q96BF6 587 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 CLIP3Q96DZ5 547 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 IWS1Q96ST2 819 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 HYPKQ9NX55 129 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 TMCO1Q9UM00 188 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 SPO11Q9Y5K1 396 aa9.88□□□□□ -0.83
MSH5-205ENST00000395853 MYL6BP14649 208 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 VEGFAP15692 232 aaPredicted RBP9.87□□□□□ -0.83
MSH5-205ENST00000395853 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
MSH5-205ENST00000395853 GNG11P61952 73 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 PHEXP78562 749 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 PEX5LQ8IYB4 626 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 CCHCR1Q8TD31 782 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 LZICQ8WZA0 190 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 NOD2Q9HC29 1040 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.83
MSH5-205ENST00000395853 TUBA8Q9NY65 449 aaPredicted RBP9.87□□□□□ -0.83
MSH5-205ENST00000395853 GGA2Q9UJY4 613 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 ITGB1BP2Q9UKP3 347 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 PNMA2Q9UL42 364 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 PALM3A6NDB9 673 aaPredicted RBP9.87□□□□□ -0.83
MSH5-205ENST00000395853 GLTPD2A6NH11 291 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 STXBP3O00186 592 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 F13A1P00488 732 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 HSPA4P34932 840 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 CRKLP46109 303 aaKnown RBP9.87□□□□□ -0.83
MSH5-205ENST00000395853 VSNL1P62760 191 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 MAP7D1Q3KQU3 841 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 ARMCX5Q6P1M9 558 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 OTUD6AQ7L8S5 288 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 OSBPL1AQ9BXW6 950 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 OXCT2Q9BYC2 517 aaPredicted RBP9.87□□□□□ -0.83
MSH5-205ENST00000395853 ZSWIM4Q9H7M6 989 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 LUC7LQ9NQ29 371 aaKnown RBP9.87□□□□□ -0.83
MSH5-205ENST00000395853 HAUS2Q9NVX0 235 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 CROTQ9UKG9 612 aa9.87□□□□□ -0.83
MSH5-205ENST00000395853 GPR75-ASB3A0A0A6YYF3 556 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 POLRMTO00411 1230 aaKnown RBP9.86□□□□□ -0.83
MSH5-205ENST00000395853 NPTXRO95502 500 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 ATP6V1G2O95670 118 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 MYBL1P10243 752 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 LMNB1P20700 586 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 OXCT1P55809 520 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 HTRA3P83110 453 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 MAMSTRQ6ZN01 415 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 CCDC121Q6ZUS5 278 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 SLC15A3Q8IY34 581 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 CCDC155Q8N6L0 562 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 JAKMIP1Q96N16 626 aaKnown RBP9.86□□□□□ -0.83
MSH5-205ENST00000395853 CENPOQ9BU64 300 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 OSBPL10Q9BXB5 764 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 PIDD1Q9HB75 910 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 DDX19AQ9NUU7 478 aaKnown RBP9.86□□□□□ -0.83
MSH5-205ENST00000395853 C9orf78Q9NZ63 289 aaPredicted RBP9.86□□□□□ -0.83
MSH5-205ENST00000395853 NRXN2Q9P2S2 1712 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 ASB3Q9Y575 518 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 GOLGA6L4A6NEF3 574 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 TMEM232C9JQI7 657 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 FUT4P22083 530 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 HOXD11P31277 338 aaPredicted RBP9.86□□□□□ -0.83
MSH5-205ENST00000395853 PSMC4P43686 418 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
MSH5-205ENST00000395853 FXNQ16595 210 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 USP33Q8TEY7 942 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 DHX58Q96C10 678 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 NOP53Q9NZM5 478 aaKnown RBP9.86□□□□□ -0.83
MSH5-205ENST00000395853 STAP2Q9UGK3 403 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 PPME1Q9Y570 386 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 DLEC1Q9Y238 1755 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 TJP1Q07157 1748 aa9.86□□□□□ -0.83
MSH5-205ENST00000395853 DYTNA2CJ06 578 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 DPPA5A6NC42 116 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 P4HA2O15460 535 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 STX6O43752 255 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 PFDN1O60925 122 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 ALDH1L1O75891 902 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 PTK7Q13308 1070 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 TSR1Q2NL82 804 aaKnown RBP9.85□□□□□ -0.83
MSH5-205ENST00000395853 THOC7Q6I9Y2 204 aaKnown RBP9.85□□□□□ -0.83
MSH5-205ENST00000395853 TEX9Q8N6V9 391 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 RILPL2Q969X0 211 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 WDR24Q96S15 920 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 SH3GL2Q99962 352 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 EXOC1Q9NV70 894 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 SLC5A4Q9NY91 659 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 DACT1Q9NYF0 836 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 BAIAP2L1Q9UHR4 511 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 CHMP3Q9Y3E7 222 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 L3MBTL1Q9Y468 752 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 A0A1B0GVL5 298 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 CUTAO60888 179 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 RAB11FIP3O75154 756 aa9.85□□□□□ -0.83
MSH5-205ENST00000395853 HSPA1AP0DMV8 641 aaKnown RBP9.85□□□□□ -0.83
MSH5-205ENST00000395853 HSPA1BP0DMV9 641 aaKnown RBP9.85□□□□□ -0.83
MSH5-205ENST00000395853 NEK2P51955 445 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms