RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 HYIQ5T013 277 aa11.6□□□□□ -0.55
HIF1A-203ENST00000394997 GALNT17Q6IS24 598 aa11.6□□□□□ -0.55
HIF1A-203ENST00000394997 ZSCAN29Q8IWY8 852 aaPredicted RBP11.6□□□□□ -0.55
HIF1A-203ENST00000394997 NUDT12Q9BQG2 462 aa11.6□□□□□ -0.55
HIF1A-203ENST00000394997 EHD4Q9H223 541 aa11.6□□□□□ -0.55
HIF1A-203ENST00000394997 DNAI1Q9UI46 699 aa11.6□□□□□ -0.55
HIF1A-203ENST00000394997 ZRANB2O95218 330 aaKnown RBP eCLIP11.59□□□□□ -0.55
HIF1A-203ENST00000394997 TMEM119Q4V9L6 283 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 SPECC1LQ69YQ0 1117 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 RSRC2Q7L4I2 434 aaKnown RBP11.59□□□□□ -0.55
HIF1A-203ENST00000394997 MKL1Q969V6 931 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 PANX2Q96RD6 677 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 BLZF1Q9H2G9 400 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 GGA1Q9UJY5 639 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 TSPY2A6NKD2 308 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
HIF1A-203ENST00000394997 KARSQ15046 597 aaKnown RBP11.59□□□□□ -0.55
HIF1A-203ENST00000394997 KRT31Q15323 416 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 DZIP1Q86YF9 867 aaKnown RBP11.59□□□□□ -0.55
HIF1A-203ENST00000394997 SMARCE1Q969G3 411 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 LENG9Q96B70 501 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
HIF1A-203ENST00000394997 JMJD4Q9H9V9 463 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 OTOFQ9HC10 1997 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 BMP15O95972 392 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 SERPINC1P01008 464 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 MMP14P50281 582 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 ERCC6LQ2NKX8 1250 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 KANK3Q6NY19 840 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 KCNK18Q7Z418 384 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 STAMQ92783 540 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 EYA3Q99504 573 aa11.59□□□□□ -0.55
HIF1A-203ENST00000394997 SYNRGQ9UMZ2 1314 aa11.58□□□□□ -0.55
HIF1A-203ENST00000394997 STX10O60499 249 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 ZCWPW2Q504Y3 356 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 MFSD14BQ5SR56 506 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 DACT2Q5SW24 774 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 TMEM260Q9NX78 707 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 ANKIB1Q9P2G1 1089 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
HIF1A-203ENST00000394997 IBSPP21815 317 aaPredicted RBP11.58□□□□□ -0.56
HIF1A-203ENST00000394997 GSTO1P78417 241 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 RBL2Q08999 1139 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 HHIPL2Q6UWX4 724 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 C7orf25Q9BPX7 421 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 COA1Q9GZY4 146 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 RGS17Q9UGC6 210 aaPredicted RBP11.58□□□□□ -0.56
HIF1A-203ENST00000394997 DICER1Q9UPY3 1922 aaKnown RBP11.58□□□□□ -0.56
HIF1A-203ENST00000394997 TRIM49BA6NDI0 452 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 MFAP3LO75121 409 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 MCM7P33993 719 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 FXR2P51116 673 aaKnown RBP eCLIP11.58□□□□□ -0.564e-8■■□□□ 11.4
HIF1A-203ENST00000394997 ADKP55263 362 aaKnown RBP11.58□□□□□ -0.56
HIF1A-203ENST00000394997 INF2Q27J81 1249 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 PPP2R2CQ9Y2T4 447 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 MYH11P35749 1972 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 CNTNAP1P78357 1384 aa11.58□□□□□ -0.56
HIF1A-203ENST00000394997 KLRF2D3W0D1 207 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 TRIM37O94972 964 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 AMPD2Q01433 879 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 HSP90AA4PQ58FG1 418 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 TCP11X2Q5H9J9 407 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 ZDHHC15Q96MV8 337 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 SOWAHDA6NJG2 315 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 YDJCA8MPS7 323 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 RPN1P04843 607 aaKnown RBP11.57□□□□□ -0.56
HIF1A-203ENST00000394997 MEA1Q16626 185 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 KIAA1755Q5JYT7 1200 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
HIF1A-203ENST00000394997 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 PIGSQ96S52 555 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 IDI2Q9BXS1 227 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 LAD1O00515 517 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 TADA3O75528 432 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 SEMA3FQ13275 785 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 DNAJC7Q99615 494 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 TRIM9Q9C026 710 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 ADGRG1Q9Y653 693 aa11.57□□□□□ -0.56
HIF1A-203ENST00000394997 FRMD3A2A2Y4 597 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 KCNA3P22001 575 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 ETF1P62495 437 aaKnown RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 ZNF543Q08ER8 600 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 ORC2Q13416 577 aaPredicted RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 SAFBQ15424 915 aaKnown RBP eCLIP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 TMC4Q7Z404 712 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 DNAJC19Q96DA6 116 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 FGFBP2Q9BYJ0 223 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 SEMA6BQ9H3T3 888 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 KAT14Q9H8E8 782 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 RSPH14Q9UHP6 348 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 MRFAP1Q9Y605 127 aa11.56□□□□□ -0.56
HIF1A-203ENST00000394997 DDTLA6NHG4 134 aaPredicted RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 PES1O00541 588 aaKnown RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 TOP1P11387 765 aaKnown RBP11.56□□□□□ -0.56
HIF1A-203ENST00000394997 AFMP43652 599 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms