RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GMCL1P1Q8NEA9 526 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 IL27Q8NEV9 243 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 OSBP2Q969R2 916 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 ACAD9Q9H845 621 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 ZNF536O15090 1300 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 PTPRSQ13332 1948 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 BMP3P12645 472 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 BMP1P13497 986 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 SMPD1P17405 629 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 PSMC6P62333 389 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 HNRNPUQ00839 825 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNCA-205ENST00000394991 TFF2Q03403 129 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 PPP2R2DQ66LE6 453 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 SCLYQ96I15 445 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 AGBL1Q96MI9 1066 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 RNF146Q9NTX7 359 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 PLIN4Q96Q06 1357 aa18.89■□□□□ 0.61
SNCA-205ENST00000394991 TET1Q8NFU7 2136 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 BRWD1Q9NSI6 2320 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 DYNC1LI2O43237 492 aaPredicted RBP18.88■□□□□ 0.61
SNCA-205ENST00000394991 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
SNCA-205ENST00000394991 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
SNCA-205ENST00000394991 SLFN13Q68D06 897 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 SYNPO2Q9UMS6 1093 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 COG6Q9Y2V7 657 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 PCDHA11Q9Y5I1 949 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 SLC4A7Q9Y6M7 1214 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 SCN10AQ9Y5Y9 1956 aa18.88■□□□□ 0.61
SNCA-205ENST00000394991 XIRP2A4UGR9 3374 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 ASB14A6NK59 587 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 TMEM232C9JQI7 657 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 TTLL1O95922 423 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 KCNQ1P51787 676 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 COL4A4P53420 1690 aaPredicted RBP18.87■□□□□ 0.61
SNCA-205ENST00000394991 TAPT1Q6NXT6 567 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 FBXO16Q8IX29 292 aaPredicted RBP18.87■□□□□ 0.61
SNCA-205ENST00000394991 APPBP2Q92624 585 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 AP5M1Q9H0R1 490 aa18.87■□□□□ 0.61
SNCA-205ENST00000394991 ZBBXA8MT70 800 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 RFXAPO00287 272 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 GPAA1O43292 621 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 FDX1P10109 184 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 TTLL4Q14679 1199 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 EEPD1Q7L9B9 569 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 ZNF444Q8N0Y2 327 aaPredicted RBP18.86■□□□□ 0.61
SNCA-205ENST00000394991 KBTBD3Q8NAB2 608 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 CHMP4CQ96CF2 233 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 FAM122AQ96E09 287 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 TSPYL2Q9H2G4 693 aaPredicted RBP18.86■□□□□ 0.61
SNCA-205ENST00000394991 DDX19BQ9UMR2 479 aa18.86■□□□□ 0.61
SNCA-205ENST00000394991 TRIP12Q14669 1992 aaPredicted RBP18.85■□□□□ 0.61
SNCA-205ENST00000394991 M0R2C6 588 aa18.85■□□□□ 0.61
SNCA-205ENST00000394991 ATP2A2P16615 1042 aaKnown RBP18.85■□□□□ 0.61
SNCA-205ENST00000394991 TDO2P48775 406 aa18.85■□□□□ 0.61
SNCA-205ENST00000394991 STAT2P52630 851 aa18.85■□□□□ 0.61
SNCA-205ENST00000394991 MUM1L1Q5H9M0 696 aa18.85■□□□□ 0.61
SNCA-205ENST00000394991 RPUSD2Q8IZ73 545 aaKnown RBP18.85■□□□□ 0.61
SNCA-205ENST00000394991 NEDD1Q8NHV4 660 aa18.85■□□□□ 0.61
SNCA-205ENST00000394991 TRERF1Q96PN7 1200 aa18.85■□□□□ 0.61
SNCA-205ENST00000394991 SEZ6LQ9BYH1 1024 aa18.85■□□□□ 0.61
SNCA-205ENST00000394991 ALDH8A1Q9H2A2 487 aaPredicted RBP18.85■□□□□ 0.61
SNCA-205ENST00000394991 ISY1Q9ULR0 285 aaKnown RBP18.85■□□□□ 0.61
SNCA-205ENST00000394991 ZEB2O60315 1214 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 ALAS1P13196 640 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 SNAP25P60880 206 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 TKFCQ3LXA3 575 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 IQSEC1Q6DN90 963 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 RASGRP2Q7LDG7 609 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 FAM160B2Q86V87 743 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 STAG1Q8WVM7 1258 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 PURBQ96QR8 312 aaKnown RBP18.84■□□□□ 0.61
SNCA-205ENST00000394991 LRRCC1Q9C099 1032 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 TRMT13Q9NUP7 481 aaKnown RBP18.84■□□□□ 0.61
SNCA-205ENST00000394991 CYP39A1Q9NYL5 469 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 Q9Y3F1 56 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 MTCH2Q9Y6C9 303 aa18.84■□□□□ 0.61
SNCA-205ENST00000394991 EPOPA6NHQ4 379 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 ERC2O15083 957 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 RNF113AO15541 343 aaKnown RBP18.83■□□□□ 0.6
SNCA-205ENST00000394991 CA3P07451 260 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 CYP2C9P11712 490 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 MS4A1P11836 297 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 POU3F3P20264 500 aaPredicted RBP18.83■□□□□ 0.6
SNCA-205ENST00000394991 GMCL1Q96IK5 515 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 ZNF287Q9HBT7 754 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 ECHDC1Q9NTX5 307 aa18.83■□□□□ 0.6
SNCA-205ENST00000394991 ARHGEF15O94989 841 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 TSPY3P0CV98 308 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 TSPY8P0CW00 308 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 IKQ13123 557 aaPredicted RBP18.82■□□□□ 0.6
SNCA-205ENST00000394991 SKIV2LQ15477 1246 aaKnown RBP18.82■□□□□ 0.6
SNCA-205ENST00000394991 TSHZ3Q63HK5 1081 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 KRT40Q6A162 431 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 DEFB128Q7Z7B8 93 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 IFNL3Q8IZI9 196 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 MIER1Q8N108 512 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 MORC4Q8TE76 937 aa18.82■□□□□ 0.6
SNCA-205ENST00000394991 CHURC1Q8WUH1 139 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms