RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
UBE2D3-208ENST00000394803 OPA1O60313 960 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 IDEP14735 1019 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 TCP1P17987 556 aaKnown RBP11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 CDC25AP30304 524 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 ZNF572Q7Z3I7 529 aaPredicted RBP11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 FBXO33Q7Z6M2 555 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 PNMA1Q8ND90 353 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 CALML4Q96GE6 196 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 CCDC42Q96M95 316 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 PURBQ96QR8 312 aaKnown RBP11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 C7orf25Q9BPX7 421 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 NOC4LQ9BVI4 516 aaKnown RBP11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 HPCAL4Q9UM19 191 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 MYH1P12882 1939 aa11.21□□□□□ -0.62
UBE2D3-208ENST00000394803 COL1A1P02452 1464 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 LRRIQ3A6PVS8 624 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 PPFIA4O75335 1185 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 GNA11P29992 359 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 HNRNPH3P31942 346 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 GSTO1P78417 241 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 MECOMQ03112 1051 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 WDR59Q6PJI9 974 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 FOXR2Q6PJQ5 311 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 CABP7Q86V35 215 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 MMGT1Q8N4V1 131 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 FAM84BQ96KN1 310 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 EDEM3Q9BZQ6 932 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 NUCKS1Q9H1E3 243 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 EFCC1Q9HA90 598 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 JADE2Q9NQC1 790 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 ROBO3Q96MS0 1386 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 CYP2D7A0A087X1C5 515 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 B4DLN1 442 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 GOLGA8KD6RF30 607 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 hCG_1984214I3L0E3 225 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 KLRC4O43908 158 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 ATP1A1P05023 1023 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 OR52Z1P0C646 297 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 GYS2P54840 703 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 PDE4DQ08499 809 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 ZNF713Q8N859 430 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 FAM76AQ8TAV0 307 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 MMS19Q96T76 1030 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 NYXQ9GZU5 481 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 C6orf50Q9HD87 102 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 RNF14Q9UBS8 474 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 MINPP1Q9UNW1 487 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 MAPK8IP1Q9UQF2 711 aa11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 THRAP3Q9Y2W1 955 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-208ENST00000394803 ZNF831Q5JPB2 1677 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 TRIM49BA6NDI0 452 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 M0R2N6 131 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 SMARCA1P28370 1054 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 MAGEA9P43362 315 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 GLE1Q53GS7 698 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 NAALADL2Q58DX5 795 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 PPM1EQ8WY54 764 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 RAB34Q9BZG1 259 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 LOC102724428A0A0B4J2F2 783 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 PVALEFA0A1B0GWK0 134 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 GOLGA6BA6NDN3 693 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 PAFAH1B1P43034 410 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 SIK1P57059 783 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 PPFIA1Q13136 1202 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 NONOQ15233 471 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 FAM47AQ5JRC9 791 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 SOGA3Q5TF21 947 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 CCDC181Q5TID7 509 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 CCNI2Q6ZMN8 369 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 ZNF444Q8N0Y2 327 aaPredicted RBP11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 SPZ1Q9BXG8 430 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 DEF6Q9H4E7 631 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 HYOU1Q9Y4L1 999 aa11.19□□□□□ -0.62
UBE2D3-208ENST00000394803 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 ENC1O14682 589 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 N4BP1O75113 896 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 BAG3O95817 575 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 TNFRSF8P28908 595 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 EPHB4P54760 987 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 ASIC1P78348 528 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 TFAP4Q01664 338 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 APBA1Q02410 837 aa11.18□□□□□ -0.62
UBE2D3-208ENST00000394803 LRRC63Q05C16 580 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms