RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PDS5AQ29RF7 1337 aaKnown RBP20.58■□□□□ 0.89
PCDHA1-202ENST00000394633 A0A1W2PQC6 194 aa20.58■□□□□ 0.89
PCDHA1-202ENST00000394633 KLRC4O43908 158 aa20.58■□□□□ 0.89
PCDHA1-202ENST00000394633 HERVK_113P62684 666 aa20.58■□□□□ 0.89
PCDHA1-202ENST00000394633 WDR59Q6PJI9 974 aa20.58■□□□□ 0.89
PCDHA1-202ENST00000394633 PCDHA4Q9UN74 947 aa20.58■□□□□ 0.89
PCDHA1-202ENST00000394633 KLRG2A4D1S0 409 aaPredicted RBP20.58■□□□□ 0.88
PCDHA1-202ENST00000394633 TSPY2A6NKD2 308 aa20.58■□□□□ 0.88
PCDHA1-202ENST00000394633 PSMD14O00487 310 aa20.58■□□□□ 0.88
PCDHA1-202ENST00000394633 KCNB1Q14721 858 aa20.58■□□□□ 0.88
PCDHA1-202ENST00000394633 ATP8A2Q9NTI2 1148 aa20.58■□□□□ 0.88
PCDHA1-202ENST00000394633 CAPN11Q9UMQ6 739 aa20.58■□□□□ 0.88
PCDHA1-202ENST00000394633 LUC7L2Q9Y383 392 aaKnown RBP20.58■□□□□ 0.88
PCDHA1-202ENST00000394633 M0R2N6 131 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 EEF1GP26641 437 aaKnown RBP20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 KIF5BP33176 963 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 SBK1Q52WX2 424 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 TYW1BQ6NUM6 668 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 TMEM60Q9H2L4 133 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 THAP9Q9H5L6 903 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 HAUS4Q9H6D7 363 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 SH3GLB2Q9NR46 395 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 TFR2Q9UP52 801 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 ENC1O14682 589 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 TUBBP07437 444 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 WDR93Q6P2C0 686 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 DTHD1Q6ZMT9 781 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 TXNRD3Q86VQ6 643 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 TMEM51Q9NW97 253 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 ARPP21Q9UBL0 812 aaPredicted RBP20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 HDAC6Q9UBN7 1215 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 FAN1Q9Y2M0 1017 aa20.57■□□□□ 0.88
PCDHA1-202ENST00000394633 PES1O00541 588 aaKnown RBP20.56■□□□□ 0.88
PCDHA1-202ENST00000394633 STAG2Q8N3U4 1231 aa20.56■□□□□ 0.88
PCDHA1-202ENST00000394633 GOLGA5Q8TBA6 731 aa20.56■□□□□ 0.88
PCDHA1-202ENST00000394633 LRRIQ3A6PVS8 624 aaPredicted RBP20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 ATP1A1P05023 1023 aaKnown RBP20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 CCDC148Q8NFR7 591 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 LRRC15Q8TF66 581 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 TRIM47Q96LD4 638 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 PLIN2Q99541 437 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 KAT14Q9H8E8 782 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 RHOBTB3O94955 611 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 PRDX5P30044 214 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 SLC4A8Q2Y0W8 1093 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 TTI2Q6NXR4 508 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 GPR101Q96P66 508 aaPredicted RBP20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 KBTBD4Q9NVX7 518 aa20.55■□□□□ 0.88
PCDHA1-202ENST00000394633 CCDC194A0A1B0GVG4 234 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 MEA1Q16626 185 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 CCDC122Q5T0U0 273 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 GIMAP8Q8ND71 665 aaPredicted RBP20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 RASSF8Q8NHQ8 419 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 CCSER1Q9C0I3 900 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 IL17RBQ9NRM6 502 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 ANKIB1Q9P2G1 1089 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 PCDHA6Q9UN73 950 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 PCDHA8Q9Y5H6 950 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 PSMA7O14818 248 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 USP17L8P0C7I0 530 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 ACTN2P35609 894 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 DNM2P50570 870 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 USP14P54578 494 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 RBM17Q96I25 401 aaKnown RBP20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 MMS19Q96T76 1030 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 DUSP9Q99956 384 aaKnown RBP20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 TTYH3Q9C0H2 523 aa20.54■□□□□ 0.88
PCDHA1-202ENST00000394633 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 RASSF10A6NK89 507 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 B4DLN1 442 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 SRGNP10124 158 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 UBA7P41226 1012 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 TFAP4Q01664 338 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 STIM1Q13586 685 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 SLC35G1Q2M3R5 365 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 PAPD7Q5XG87 772 aaKnown RBP20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 PNMA1Q8ND90 353 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 ANKRD2Q9GZV1 360 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 MAGEC2Q9UBF1 373 aaPredicted RBP20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 SRGAP2O75044 1071 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 MYL1P05976 194 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 INF2Q27J81 1249 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 TSR1Q2NL82 804 aaKnown RBP20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 ZNF662Q6ZS27 426 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 FAM71BQ8TC56 605 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 AGPAT5Q9NUQ2 364 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 SAR1BQ9Y6B6 198 aa20.53■□□□□ 0.88
PCDHA1-202ENST00000394633 GRM4Q14833 912 aa20.52■□□□□ 0.88
PCDHA1-202ENST00000394633 CCDC102AQ96A19 550 aa20.52■□□□□ 0.88
PCDHA1-202ENST00000394633 TUBGCP2Q9BSJ2 902 aa20.52■□□□□ 0.88
PCDHA1-202ENST00000394633 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.88
PCDHA1-202ENST00000394633 MAD2L2Q9UI95 211 aa20.52■□□□□ 0.88
PCDHA1-202ENST00000394633 RCCD1A6NED2 376 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 KLK7P49862 253 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 KRT83P78385 493 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 GPSM2P81274 684 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 KIAA1328Q86T90 577 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 DGKHQ86XP1 1220 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms