RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 LETM2Q2VYF4 491 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 GPATCH4Q5T3I0 446 aaKnown RBP8.1□□□□□ -1.11
SMAD1-202ENST00000394092 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 SYT10Q6XYQ8 523 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 SLC51AQ86UW1 340 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 CABP7Q86V35 215 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 TMEM139Q8IV31 216 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 IGSF22Q8N9C0 903 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 NELFBQ8WX92 580 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 CALML4Q96GE6 196 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 MASTLQ96GX5 879 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 CCDC17Q96LX7 622 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 GLT8D2Q9H1C3 349 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 EHD4Q9H223 541 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 BLZF1Q9H2G9 400 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 LIMA1Q9UHB6 759 aaKnown RBP8.1□□□□□ -1.11
SMAD1-202ENST00000394092 PPP2R2CQ9Y2T4 447 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
SMAD1-202ENST00000394092 ZNF646O15015 1829 aaPredicted RBP8.09□□□□□ -1.11
SMAD1-202ENST00000394092 IGKV6D-41A0A0C4DH26 115 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 BICDL2A1A5D9 508 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 RIMBP2O15034 1052 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 PLSCR1O15162 318 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 RHOBTB3O94955 611 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 CCDC175P0C221 793 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 EEF1GP26641 437 aaKnown RBP8.09□□□□□ -1.11
SMAD1-202ENST00000394092 CASP1P29466 404 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 PBX1P40424 430 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 FKBP1AP62942 108 aaKnown RBP8.09□□□□□ -1.11
SMAD1-202ENST00000394092 APTXQ7Z2E3 356 aaKnown RBP8.09□□□□□ -1.11
SMAD1-202ENST00000394092 PODNQ7Z5L7 613 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 FAM114A1Q8IWE2 563 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 SMYD4Q8IYR2 804 aaPredicted RBP8.09□□□□□ -1.11
SMAD1-202ENST00000394092 STAMQ92783 540 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 MED15Q96RN5 788 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 PIGSQ96S52 555 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 LRRC27Q9C0I9 530 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 TMEM60Q9H2L4 133 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 DHX36Q9H2U1 1008 aaKnown RBP8.09□□□□□ -1.11
SMAD1-202ENST00000394092 THAP9Q9H5L6 903 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 KBTBD4Q9NVX7 518 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 MAGEC2Q9UBF1 373 aaPredicted RBP8.09□□□□□ -1.11
SMAD1-202ENST00000394092 STK17AQ9UEE5 414 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 DNAI1Q9UI46 699 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 MYH7BA7E2Y1 1941 aa8.09□□□□□ -1.11
SMAD1-202ENST00000394092 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 LRRC10BA6NIK2 292 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 USP17L5A8MUK1 530 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 KCNJ18B7U540 433 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 N4BP3O15049 544 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 MFAP3LO75121 409 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 AKR1B1P15121 316 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 COPB1P53618 953 aaKnown RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 ZNF543Q08ER8 600 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 KCNJ12Q14500 433 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 KRT31Q15323 416 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 ADSSL1Q8N142 457 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 GIMAP8Q8ND71 665 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 ZNF397Q8NF99 534 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 TBCKQ8TEA7 893 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 TSC1Q92574 1164 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 CDK5RAP3Q96JB5 506 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 FEZ1Q99689 392 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 MTRQ99707 1265 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 MRIQ9BWK5 157 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 EXOC1Q9NV70 894 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 USP40Q9NVE5 1235 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 ZNF215Q9UL58 517 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 SIPA1L1O43166 1804 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 PSME4Q14997 1843 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 POTEFA5A3E0 1075 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 F8W031 263 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 ADAMTS3O15072 1205 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 GCFC2P16383 781 aaKnown RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 PLCG1P19174 1290 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 FECHP22830 423 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 PRCPP42785 496 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 ADKP55263 362 aaKnown RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 CALCRLQ16602 461 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 COBLL1Q53SF7 1204 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 NAALADL2Q58DX5 795 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 TCP11X2Q5H9J9 407 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 MCTP2Q6DN12 878 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 CNNM4Q6P4Q7 775 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 REXO1L1PQ8IX06 675 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 MNS1Q8NEH6 495 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 CUL5Q93034 780 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 DHTKD1Q96HY7 919 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-202ENST00000394092 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 TRIM34Q9BYJ4 488 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
SMAD1-202ENST00000394092 TNS1Q9HBL0 1735 aaKnown RBP8.07□□□□□ -1.12
SMAD1-202ENST00000394092 FRMPD2Q68DX3 1309 aaPredicted RBP8.07□□□□□ -1.12
SMAD1-202ENST00000394092 A0A1W2PQC6 194 aa8.07□□□□□ -1.12
SMAD1-202ENST00000394092 TEX33O43247 280 aa8.07□□□□□ -1.12
SMAD1-202ENST00000394092 SLC26A4O43511 780 aa8.07□□□□□ -1.12
SMAD1-202ENST00000394092 CDC25AP30304 524 aa8.07□□□□□ -1.12
SMAD1-202ENST00000394092 CASQ1P31415 396 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms