RNA–Protein interactions for RNA: ENST00000394072.7

TNS4-202, Transcript of tensin 4, humanhuman

TSL 1 (best)

Gene TNS4, Length 2,174 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS4-202ENST00000394072 AFMP43652 599 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 TNNT3P45378 269 aaPredicted RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 RHBDL3P58872 404 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 ZNF772Q68DY9 489 aaPredicted RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 PNKPQ96T60 521 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 EYA3Q99504 573 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 COA1Q9GZY4 146 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 ABCB6Q9NP58 842 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 ADD3Q9UEY8 706 aaKnown RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 L1RE1Q9UN81 338 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 TTF2Q9UNY4 1162 aaKnown RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 MYH4Q9Y623 1939 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 A0A0U1RQJ8 604 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 TUBBP07437 444 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 IVLP07476 585 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 CTAGE8P0CG41 777 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 CUL4BQ13620 913 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 APTXQ7Z2E3 356 aaKnown RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 CTAGE4Q8IX94 777 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 SLC35F6Q8N357 371 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 ATRIPQ8WXE1 791 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 NAPGQ99747 312 aaPredicted RBP13.15□□□□□ -0.3
TNS4-202ENST00000394072 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
TNS4-202ENST00000394072 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 MYO1CO00159 1063 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 STXBP3O00186 592 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 PBX1P40424 430 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 DDR1Q08345 913 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 WHAMMP3Q1A5X7 153 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
TNS4-202ENST00000394072 PDXDC2PQ6P474 469 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 TMTC1Q8IUR5 882 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
TNS4-202ENST00000394072 MCM7P33993 719 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 CDKAL1Q5VV42 579 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 WWC2Q6AWC2 1192 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 C10orf67Q8IYJ2 551 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 ACBD3Q9H3P7 528 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 PCDHA6Q9UN73 950 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 PCDHA8Q9Y5H6 950 aa13.14□□□□□ -0.31
TNS4-202ENST00000394072 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
TNS4-202ENST00000394072 CYTH3O43739 400 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 VEGFAP15692 232 aaPredicted RBP13.13□□□□□ -0.31
TNS4-202ENST00000394072 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
TNS4-202ENST00000394072 GNA11P29992 359 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 MMP14P50281 582 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 DTHD1Q6ZMT9 781 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 KRT25Q7Z3Z0 450 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
TNS4-202ENST00000394072 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 GPR101Q96P66 508 aaPredicted RBP13.13□□□□□ -0.31
TNS4-202ENST00000394072 MAGEF1Q9HAY2 307 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
TNS4-202ENST00000394072 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNS4-202ENST00000394072 MAPK8IP2Q13387 824 aaPredicted RBP13.13□□□□□ -0.31
TNS4-202ENST00000394072 CASP8Q14790 479 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 SRLQ86TD4 932 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 ACRBPQ8NEB7 543 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 AK8Q96MA6 479 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 CUEDC2Q9H467 287 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
TNS4-202ENST00000394072 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
TNS4-202ENST00000394072 ITIH6Q6UXX5 1313 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 N4BP1O75113 896 aaKnown RBP13.12□□□□□ -0.31
TNS4-202ENST00000394072 GYPCP04921 128 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 VSNL1P62760 191 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 SPAG1Q07617 926 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 IL17AQ16552 155 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 HEATR3Q7Z4Q2 680 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 ZBTB9Q96C00 473 aa13.12□□□□□ -0.31
TNS4-202ENST00000394072 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms