RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 KIAA1211Q6ZU35 1233 aa6.68□□□□□ -1.34
NPM1-203ENST00000393820 NKD1Q969G9 470 aa6.68□□□□□ -1.34
NPM1-203ENST00000393820 LTV1Q96GA3 475 aaPredicted RBP6.68□□□□□ -1.34
NPM1-203ENST00000393820 NECAB3Q96P71 396 aaPredicted RBP6.68□□□□□ -1.34
NPM1-203ENST00000393820 LPIN3Q9BQK8 851 aa6.68□□□□□ -1.34
NPM1-203ENST00000393820 BHLHE41Q9C0J9 482 aaPredicted RBP6.68□□□□□ -1.34
NPM1-203ENST00000393820 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
NPM1-203ENST00000393820 RASSF4Q9H2L5 321 aa6.68□□□□□ -1.34
NPM1-203ENST00000393820 POLKQ9UBT6 870 aa6.68□□□□□ -1.34
NPM1-203ENST00000393820 FLT4P35916 1363 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 LY75O60449 1722 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 METTL12A8MUP2 240 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 M0R082 166 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 TWISTNBQ3B726 338 aaPredicted RBP6.67□□□□□ -1.34
NPM1-203ENST00000393820 ZSCAN23Q3MJ62 389 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 TNNI3KQ59H18 835 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 ELMSAN1Q6PJG2 1045 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 TRIM42Q8IWZ5 723 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 CELF2-AS1Q8N7Q2 184 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 ANKRD44Q8N8A2 993 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 CEP120Q8N960 986 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 ZNF417Q8TAU3 575 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 ZNF587Q96SQ5 575 aaPredicted RBP6.67□□□□□ -1.34
NPM1-203ENST00000393820 KANSL2Q9H9L4 492 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 TPSG1Q9NRR2 321 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 COL4A3BPQ9Y5P4 624 aa6.67□□□□□ -1.34
NPM1-203ENST00000393820 CCDC85CA6NKD9 419 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 EPB41L2O43491 1005 aaKnown RBP6.66□□□□□ -1.34
NPM1-203ENST00000393820 MBD3O95983 291 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 GHRHP01286 108 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 GSPT1P15170 499 aaKnown RBP6.66□□□□□ -1.34
NPM1-203ENST00000393820 IBSPP21815 317 aaPredicted RBP6.66□□□□□ -1.34
NPM1-203ENST00000393820 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 LRP8Q14114 963 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 SPRED3Q2MJR0 410 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 SEZ6Q53EL9 994 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 MCTP1Q6DN14 999 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 C20orf204Q6ZNR8 217 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 MICALL1Q8N3F8 863 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 SH3TC2Q8TF17 1288 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 PLD4Q96BZ4 506 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 PLVAPQ9BX97 442 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 JPH1Q9HDC5 661 aaPredicted RBP6.66□□□□□ -1.34
NPM1-203ENST00000393820 SEC31BQ9NQW1 1179 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 R3HCC1Q9Y3T6 440 aaKnown RBP6.66□□□□□ -1.34
NPM1-203ENST00000393820 ANKRD26Q9UPS8 1709 aa6.66□□□□□ -1.34
NPM1-203ENST00000393820 NFKBIEO00221 500 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 MARCH6O60337 910 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 F13A1P00488 732 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 IL13P35225 146 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 DDR2Q16832 855 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 PRSS36Q5K4E3 855 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 LRSAM1Q6UWE0 723 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 BNC2Q6ZN30 1099 aaPredicted RBP6.65□□□□□ -1.34
NPM1-203ENST00000393820 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 COL23A1Q86Y22 540 aaPredicted RBP6.65□□□□□ -1.34
NPM1-203ENST00000393820 TSPYL6Q8N831 410 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 FBXO27Q8NI29 283 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 PKNOX2Q96KN3 472 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 CCDC113Q9H0I3 377 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 ZNF576Q9H609 170 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 CCDC39Q9UFE4 941 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 TRIM33Q9UPN9 1127 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 MEGF6O75095 1541 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 PTPRCP08575 1304 aa6.65□□□□□ -1.34
NPM1-203ENST00000393820 HMMRO75330 724 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 RGS9O75916 674 aaPredicted RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 GIPRP48546 466 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 ANAPC15P60006 121 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 RRS1Q15050 365 aaKnown RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 RPS26P11Q5JNZ5 115 aaPredicted RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 CEP135Q66GS9 1140 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 GDF6Q6KF10 455 aaPredicted RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 CAVIN1Q6NZI2 390 aaKnown RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 CCDC84Q86UT8 332 aaPredicted RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 TMEM102Q8N9M5 508 aaPredicted RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 IL17RAQ96F46 866 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 INTS4Q96HW7 963 aaKnown RBP6.65□□□□□ -1.35
NPM1-203ENST00000393820 PHACTR3Q96KR7 559 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 RBSNQ9H1K0 784 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 PCDH12Q9NPG4 1184 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 ZKSCAN5Q9Y2L8 839 aa6.65□□□□□ -1.35
NPM1-203ENST00000393820 PALLDQ8WX93 1383 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 DOT1LQ8TEK3 1739 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 A0A096LPE4 126 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 A0A1W2PPZ6 126 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 FAM221AA4D161 298 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 SPDYE3A6NKU9 549 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 DYNC1I1O14576 645 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 ERC2O15083 957 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 DNAJC6O75061 913 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 SDSP20132 328 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 EIF6P56537 245 aaKnown RBP6.64□□□□□ -1.35
NPM1-203ENST00000393820 PCSK7Q16549 785 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 HSP90AB2PQ58FF8 381 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 LILRB2Q8N423 598 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 C8orf58Q8NAV2 365 aa6.64□□□□□ -1.35
NPM1-203ENST00000393820 GATAD2BQ8WXI9 593 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms