RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 APPBP2Q92624 585 aa23.66■■□□□ 1.38
POLR2J-202ENST00000393794 LCTP09848 1927 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 ASB14A6NK59 587 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 B4GALT4O60513 344 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 PRDM1O75626 825 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 PTGS1P23219 599 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 HNRNPUQ00839 825 aaKnown RBP eCLIP23.65■■□□□ 1.38
POLR2J-202ENST00000393794 SLFN13Q68D06 897 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 TLK2Q86UE8 772 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 TRPV6Q9H1D0 765 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 COG6Q9Y2V7 657 aa23.65■■□□□ 1.38
POLR2J-202ENST00000393794 IGFBP4P22692 258 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 CCL23P55773 120 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 TKFCQ3LXA3 575 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 TMEM63BQ5T3F8 832 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 IQSEC1Q6DN90 963 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 ZNF444Q8N0Y2 327 aaPredicted RBP23.64■■□□□ 1.37
POLR2J-202ENST00000393794 LRRC47Q8N1G4 583 aaKnown RBP23.64■■□□□ 1.37
POLR2J-202ENST00000393794 GMCL1Q96IK5 515 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 PDGFCQ9NRA1 345 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 CTDP1Q9Y5B0 961 aaPredicted RBP23.64■■□□□ 1.37
POLR2J-202ENST00000393794 PCDHA11Q9Y5I1 949 aa23.64■■□□□ 1.37
POLR2J-202ENST00000393794 GPAA1O43292 621 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 RABGGTBP53611 331 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 STAG1Q8WVM7 1258 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 LRRCC1Q9C099 1032 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 ZNF287Q9HBT7 754 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 HOMER2Q9NSB8 354 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 ECHDC1Q9NTX5 307 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 RNF146Q9NTX7 359 aa23.63■■□□□ 1.37
POLR2J-202ENST00000393794 DDX49Q9Y6V7 483 aaKnown RBP23.63■■□□□ 1.37
POLR2J-202ENST00000393794 TMEM232C9JQI7 657 aa23.62■■□□□ 1.37
POLR2J-202ENST00000393794 RNF113AO15541 343 aaKnown RBP23.62■■□□□ 1.37
POLR2J-202ENST00000393794 DYNC1LI2O43237 492 aaPredicted RBP23.62■■□□□ 1.37
POLR2J-202ENST00000393794 MYOGP15173 224 aa23.62■■□□□ 1.37
POLR2J-202ENST00000393794 GNAT2P19087 354 aa23.62■■□□□ 1.37
POLR2J-202ENST00000393794 PLA2G5P39877 138 aa23.62■■□□□ 1.37
POLR2J-202ENST00000393794 STAT2P52630 851 aa23.62■■□□□ 1.37
POLR2J-202ENST00000393794 FAM160B2Q86V87 743 aa23.62■■□□□ 1.37
POLR2J-202ENST00000393794 RPUSD2Q8IZ73 545 aaKnown RBP23.62■■□□□ 1.37
POLR2J-202ENST00000393794 SLC4A7Q9Y6M7 1214 aa23.62■■□□□ 1.37
POLR2J-202ENST00000393794 PATL2C9JE40 543 aaKnown RBP23.61■■□□□ 1.37
POLR2J-202ENST00000393794 SMARCA5O60264 1052 aaPredicted RBP23.61■■□□□ 1.37
POLR2J-202ENST00000393794 IFNL3Q8IZI9 196 aa23.61■■□□□ 1.37
POLR2J-202ENST00000393794 CHURC1Q8WUH1 139 aa23.61■■□□□ 1.37
POLR2J-202ENST00000393794 TRERF1Q96PN7 1200 aa23.61■■□□□ 1.37
POLR2J-202ENST00000393794 AP5M1Q9H0R1 490 aa23.61■■□□□ 1.37
POLR2J-202ENST00000393794 ALDH8A1Q9H2A2 487 aaPredicted RBP23.61■■□□□ 1.37
POLR2J-202ENST00000393794 CYP39A1Q9NYL5 469 aa23.61■■□□□ 1.37
POLR2J-202ENST00000393794 M0R2C6 588 aa23.6■■□□□ 1.37
POLR2J-202ENST00000393794 ZEB2O60315 1214 aa23.6■■□□□ 1.37
POLR2J-202ENST00000393794 PSMC6P62333 389 aa23.6■■□□□ 1.37
POLR2J-202ENST00000393794 SCN10AQ9Y5Y9 1956 aa23.6■■□□□ 1.37
POLR2J-202ENST00000393794 ERC2O15083 957 aa23.59■■□□□ 1.37
POLR2J-202ENST00000393794 ZFYP08048 801 aaPredicted RBP23.59■■□□□ 1.37
POLR2J-202ENST00000393794 NOVP48745 357 aa23.59■■□□□ 1.37
POLR2J-202ENST00000393794 MUM1L1Q5H9M0 696 aa23.59■■□□□ 1.37
POLR2J-202ENST00000393794 PPP2R2DQ66LE6 453 aa23.59■■□□□ 1.37
POLR2J-202ENST00000393794 NOL8Q76FK4 1167 aaKnown RBP23.59■■□□□ 1.37
POLR2J-202ENST00000393794 SCLYQ96I15 445 aa23.59■■□□□ 1.37
POLR2J-202ENST00000393794 NECAB3Q96P71 396 aaPredicted RBP23.59■■□□□ 1.37
POLR2J-202ENST00000393794 VTA1Q9NP79 307 aa23.59■■□□□ 1.37
POLR2J-202ENST00000393794 SCN5AQ14524 2016 aa23.59■■□□□ 1.37
POLR2J-202ENST00000393794 BRWD1Q9NSI6 2320 aa23.58■■□□□ 1.37
POLR2J-202ENST00000393794 PFKMP08237 780 aa23.58■■□□□ 1.37
POLR2J-202ENST00000393794 TFF2Q03403 129 aa23.58■■□□□ 1.37
POLR2J-202ENST00000393794 TTLL4Q14679 1199 aa23.58■■□□□ 1.37
POLR2J-202ENST00000393794 DUSP28Q4G0W2 176 aa23.58■■□□□ 1.37
POLR2J-202ENST00000393794 FBXO16Q8IX29 292 aaPredicted RBP23.58■■□□□ 1.37
POLR2J-202ENST00000393794 MTCH2Q9Y6C9 303 aa23.58■■□□□ 1.37
POLR2J-202ENST00000393794 RBM47A0AV96 593 aaKnown RBP23.57■■□□□ 1.36
POLR2J-202ENST00000393794 ATP2A2P16615 1042 aaKnown RBP23.57■■□□□ 1.36
POLR2J-202ENST00000393794 TDO2P48775 406 aa23.57■■□□□ 1.36
POLR2J-202ENST00000393794 TFAP4Q01664 338 aa23.57■■□□□ 1.36
POLR2J-202ENST00000393794 RCSD1Q6JBY9 416 aa23.57■■□□□ 1.36
POLR2J-202ENST00000393794 TSPYL2Q9H2G4 693 aaPredicted RBP23.57■■□□□ 1.36
POLR2J-202ENST00000393794 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
POLR2J-202ENST00000393794 PRR12Q9ULL5 1215 aa23.57■■□□□ 1.36
POLR2J-202ENST00000393794 TET1Q8NFU7 2136 aa23.57■■□□□ 1.36
POLR2J-202ENST00000393794 TSPY3P0CV98 308 aa23.56■■□□□ 1.36
POLR2J-202ENST00000393794 TSPY8P0CW00 308 aa23.56■■□□□ 1.36
POLR2J-202ENST00000393794 ALAS1P13196 640 aa23.56■■□□□ 1.36
POLR2J-202ENST00000393794 MCCP23508 829 aa23.56■■□□□ 1.36
POLR2J-202ENST00000393794 SLC1A4P43007 532 aa23.56■■□□□ 1.36
POLR2J-202ENST00000393794 PURBQ96QR8 312 aaKnown RBP23.56■■□□□ 1.36
POLR2J-202ENST00000393794 IL17RBQ9NRM6 502 aa23.56■■□□□ 1.36
POLR2J-202ENST00000393794 TRMT13Q9NUP7 481 aaKnown RBP23.56■■□□□ 1.36
POLR2J-202ENST00000393794 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
POLR2J-202ENST00000393794 LOC102724159A0A0B4J2E5 919 aa23.55■■□□□ 1.36
POLR2J-202ENST00000393794 PURAQ00577 322 aaKnown RBP23.55■■□□□ 1.36
POLR2J-202ENST00000393794 PDE4BQ07343 736 aa23.55■■□□□ 1.36
POLR2J-202ENST00000393794 PWP2Q15269 919 aaKnown RBP23.55■■□□□ 1.36
POLR2J-202ENST00000393794 EEPD1Q7L9B9 569 aa23.55■■□□□ 1.36
POLR2J-202ENST00000393794 C1QTNF1Q9BXJ1 281 aa23.55■■□□□ 1.36
POLR2J-202ENST00000393794 ARIH1Q9Y4X5 557 aaPredicted RBP23.55■■□□□ 1.36
POLR2J-202ENST00000393794 EPOPA6NHQ4 379 aa23.54■■□□□ 1.36
POLR2J-202ENST00000393794 FOXP2O15409 715 aa23.54■■□□□ 1.36
POLR2J-202ENST00000393794 SUPT20HL2P0C7V6 817 aa23.54■■□□□ 1.36
POLR2J-202ENST00000393794 KCNQ1P51787 676 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms