RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SEPT12Q8IYM1 358 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 PPM1EQ8WY54 764 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 WDR24Q96S15 920 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 TUBGCP2Q9BSJ2 902 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 LRRC27Q9C0I9 530 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 IQCEQ6IPM2 695 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 GDAP1L1Q96MZ0 367 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 TMEM260Q9NX78 707 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 ANAPC4Q9UJX5 808 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 EPN1Q9Y6I3 576 aaPredicted RBP11.73□□□□□ -0.53
CALD1-203ENST00000393118 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 EHBP1Q8NDI1 1231 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 JAKMIP2Q96AA8 810 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 ALS2CR12Q96Q35 445 aa11.73□□□□□ -0.53
CALD1-203ENST00000393118 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 C2CD5Q86YS7 1000 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 RWDD2AQ9UIY3 292 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 EFCAB8A8MWE9 144 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 CHMP2AO43633 222 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 CLCN6P51797 869 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 TXNRD1Q16881 649 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 ARL6IP4Q66PJ3 421 aaKnown RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 GALNT17Q6IS24 598 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 RASGRP2Q7LDG7 609 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 CNOT6LQ96LI5 555 aaKnown RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 PCDHA12Q9UN75 941 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 MFAP3LO75121 409 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 TACC1O75410 805 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 PPP2R5AQ15172 486 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 TCP11X2Q5H9J9 407 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 NCAPH2Q6IBW4 605 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 EP400NLQ6ZTU2 488 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 TAF4BQ92750 862 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 TMEM60Q9H2L4 133 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 PLEKHA4Q9H4M7 779 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 BBOX1O75936 387 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 PNMA6AP0CW24 399 aaPredicted RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 NF2P35240 595 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 RNF187Q5TA31 235 aaPredicted RBP11.72□□□□□ -0.53
CALD1-203ENST00000393118 RRAGAQ7L523 313 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 HPS3Q969F9 1004 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 PKD2L1Q9P0L9 805 aa11.72□□□□□ -0.53
CALD1-203ENST00000393118 SHTN1A0MZ66 631 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 DNM2P50570 870 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 GRM4Q14833 912 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 DCAF17Q5H9S7 520 aaPredicted RBP11.71□□□□□ -0.53
CALD1-203ENST00000393118 ANKRD13CQ8N6S4 541 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 TC2NQ8N9U0 490 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 CCDC51Q96ER9 411 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 SAMM50Q9Y512 469 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.53
CALD1-203ENST00000393118 A0A087X0B3 334 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 POTEMA6NI47 508 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 BMP6P22004 513 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 FAM212AQ96EL1 285 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 TMCO5BA8MYB1 307 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 RNASE9P60153 205 aaKnown RBP11.71□□□□□ -0.54
CALD1-203ENST00000393118 DPYDQ12882 1025 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 PLS1Q14651 629 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 MAP9Q49MG5 647 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 BARGINQ6ZT62 677 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 CEP57Q86XR8 500 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 BARHL2Q9NY43 387 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 DDX25Q9UHL0 483 aaKnown RBP11.71□□□□□ -0.54
CALD1-203ENST00000393118 C5P01031 1676 aa11.71□□□□□ -0.54
CALD1-203ENST00000393118 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
CALD1-203ENST00000393118 SNAP25P60880 206 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 CYP27A1Q02318 531 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 CCDC65Q8IXS2 484 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 SPICE1Q8N0Z3 855 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 PCDHA1Q9Y5I3 950 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
CALD1-203ENST00000393118 CYP2C19P33261 490 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 P2RX5Q93086 422 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 NCAPGQ9BPX3 1015 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 PCDHA6Q9UN73 950 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 PCDHA8Q9Y5H6 950 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 FXR1P51114 621 aaKnown RBP eCLIP11.7□□□□□ -0.54
CALD1-203ENST00000393118 PRR16Q569H4 304 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 GPR161Q8N6U8 529 aaKnown RBP11.7□□□□□ -0.54
CALD1-203ENST00000393118 GOLGA5Q8TBA6 731 aa11.7□□□□□ -0.54
CALD1-203ENST00000393118 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms