RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 A0A1W2PQJ5 194 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 GSTM1P09488 218 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 SMAD4Q13485 552 aaKnown RBP3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 ICAM4Q14773 271 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 RGL3Q3MIN7 710 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 HLA-DQA1Q5Y7H0 255 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 USP51Q70EK9 711 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 JAMLQ86YT9 394 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 AEBP1Q8IUX7 1158 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 ZBTB8AQ96BR9 441 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 RHOVQ96L33 236 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 SYT3Q9BQG1 590 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 SLC12A9Q9BXP2 914 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 DBR1Q9UK59 544 aaKnown RBP3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 ZNF536O15090 1300 aa3.18□□□□□ -1.9
RNU6-239P-201ENST00000390990 PRPF40AO75400 957 aaKnown RBP3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 CLEC3AO75596 197 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 FAM160A1Q05DH4 1040 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 RAD51AP2Q09MP3 1159 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 TAF1CQ15572 869 aaPredicted RBP3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 CDCP2Q5VXM1 449 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 GLB1LQ6UWU2 654 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 TTLL7Q6ZT98 887 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 TMEM192Q8IY95 271 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 LGI4Q8N135 537 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 NAT16Q8N8M0 369 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 DUSP9Q99956 384 aaKnown RBP3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 KLC2Q9H0B6 622 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 CD248Q9HCU0 757 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 GMIPQ9P107 970 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 PPP4R1LQ9P1A2 415 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 FBXL21Q9UKT6 434 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 LTBP3Q9NS15 1303 aa3.17□□□□□ -1.9
RNU6-239P-201ENST00000390990 TLR3O15455 904 aaKnown RBP3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 GLI4P10075 376 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 GARTP22102 1010 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 ST13P50502 369 aaKnown RBP3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 CACNB2Q08289 660 aaPredicted RBP3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 KIAA2012Q0VF49 1180 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 AUHQ13825 339 aaKnown RBP3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 MLECQ14165 292 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 MPP2Q14168 576 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 OVOS1Q6IE37 1185 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 LINC00482Q8N8I6 264 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 GOLM1Q8NBJ4 401 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 CPA5Q8WXQ8 436 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 DDX11Q96FC9 970 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 MKRN2Q9H000 416 aaKnown RBP3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 CNNM2Q9H8M5 875 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 FBLN5Q9UBX5 448 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 PCDHB14Q9Y5E9 798 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 PCDHB12Q9Y5F1 795 aa3.16□□□□□ -1.9
RNU6-239P-201ENST00000390990 MROH6A6NGR9 719 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 FGF10O15520 208 aaPredicted RBP3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 ATE1O95260 518 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 GSNP06396 782 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 CTSHP09668 335 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 ACRP10323 421 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 GBP2P32456 591 aaPredicted RBP3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 MCTP2Q6DN12 878 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 PALM2Q8IXS6 379 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 NLGN2Q8NFZ4 835 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 ATG4CQ96DT6 458 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 TSPAN17Q96FV3 270 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 TMEM74Q96NL1 305 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 GORASP1Q9BQQ3 440 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 BRMS1Q9HCU9 246 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 C11orf21Q9P2W6 132 aa3.15□□□□□ -1.91
RNU6-239P-201ENST00000390990 USP31Q70CQ4 1352 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 MINDY4BA8MYZ0 360 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 H0Y8X5 98 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 SHOXO15266 292 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 GPR42O15529 346 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 SMARCA5O60264 1052 aaPredicted RBP3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 B4GALT3O60512 393 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 RPL13P26373 211 aaKnown RBP3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 CORO7P57737 925 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 R3HDM1Q15032 1099 aaKnown RBP3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 SNAP47Q5SQN1 464 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 C9orf131Q5VYM1 1079 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 ZNF585AQ6P3V2 769 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 BORAQ6PGQ7 559 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 FAM196AQ6ZSG2 479 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 NLRC3Q7RTR2 1065 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 USP48Q86UV5 1035 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 DNERQ8NFT8 737 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 SLC6A18Q96N87 628 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 WWC2-AS2Q96NR7 200 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 CDK5RAP1Q96SZ6 601 aaKnown RBP3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 SRRTQ9BXP5 876 aaKnown RBP3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 PRR13Q9NZ81 148 aa3.14□□□□□ -1.91
RNU6-239P-201ENST00000390990 LAMTOR5O43504 91 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 PPP1R11O60927 126 aaPredicted RBP3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 C8BP07358 591 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 THBS2P35442 1172 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 CCNFP41002 786 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 HNRNPA0Q13151 305 aaKnown RBP3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 FAM26FQ5R3K3 315 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 CYP2R1Q6VVX0 501 aa3.13□□□□□ -1.91
RNU6-239P-201ENST00000390990 FAM124AQ86V42 546 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms