RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 DDX3XO00571 662 aaKnown RBP eCLIP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 IRF6O14896 467 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TP73O15350 636 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SRGAP3O43295 1099 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 GRID2O43424 1007 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PPP1R12BO60237 982 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 BRINP1O60477 761 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 B4GALT4O60513 344 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MOSPD3O75425 235 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RPS6KA4O75676 772 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PPP1R15AO75807 674 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RECQL4O94761 1208 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SEC24DO94855 1032 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SLITRK5O94991 958 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MATN4O95460 622 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CNOT4O95628 575 aaKnown RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ABHD16AO95870 558 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TBX6O95947 436 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CYBBP04839 570 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SNRPB2P08579 225 aaKnown RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CYP2C8P10632 490 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KRT5P13647 590 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PRKCAP17252 672 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TYRP1P17643 537 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PMLP29590 882 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 LTBRP36941 435 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MC3RP41968 323 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 AVPR1BP47901 424 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 VEGFCP49767 419 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PLCD1P51178 756 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF134P52741 427 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 USP14P54578 494 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RTP1P59025 263 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CYP4F8P98187 520 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 POU4F1Q01851 419 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TEKQ02763 1124 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 HHEXQ03014 270 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 OCA2Q04671 838 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PSME1Q06323 249 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PCDH1Q08174 1060 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CRHR2Q13324 411 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 AP3B2Q13367 1082 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 FKBP5Q13451 457 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 LAMB3Q13751 1172 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ERV3-1Q14264 604 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SEMA3AQ14563 771 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SLC1A5Q15758 541 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 NFE2Q16621 373 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MRGPRG-AS1Q2M3A8 158 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KIF4BQ2VIQ3 1234 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MAP7D1Q3KQU3 841 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF260Q3ZCT1 412 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 LEXMQ3ZCV2 418 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SLFNL1Q499Z3 407 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZC3H12AQ5D1E8 599 aaKnown RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SH3D19Q5HYK7 790 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 LY6G5CQ5SRR4 150 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PRAMEF18Q5VWM3 479 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SLC9A4Q6AI14 798 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KCNV1Q6PIU1 500 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 Q6YL49 198 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF662Q6ZS27 426 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 Q6ZSN1 163 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PTF1AQ7RTS3 328 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 BMP8AQ7Z5Y6 402 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KRT77Q7Z794 578 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RALYLQ86SE5 291 aaKnown RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MRGPREQ86SM8 312 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CUZD1Q86UP6 607 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 MYPOPQ86VE0 399 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TSPYL5Q86VY4 417 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RFX6Q8HWS3 928 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TMPRSS6Q8IU80 811 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 GPIHBP1Q8IV16 184 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 DCP1BQ8IZD4 617 aaKnown RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 IFNL2Q8IZJ0 200 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 TNS4Q8IZW8 715 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 FUKQ8N0W3 1084 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 LYG1Q8N1E2 194 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KLHL36Q8N4N3 616 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF808Q8N4W9 903 aaPredicted RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SH2D3CQ8N5H7 860 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 DTX3Q8N9I9 347 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 KCT2Q8NC54 265 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RNF214Q8ND24 703 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 BEND2Q8NDZ0 799 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 SUPT20HQ8NEM7 779 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 REPS2Q8NFH8 660 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 PROKR1Q8TCW9 393 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 EPS8L1Q8TE68 723 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 DENND1AQ8TEH3 1009 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CPA5Q8WXQ8 436 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 ALG3Q92685 438 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 RPL36ALQ969Q0 106 aaKnown RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 CCDC102AQ96A19 550 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 HMCESQ96FZ2 354 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 HHIPL1Q96JK4 782 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 LYZL4Q96KX0 146 aa-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 YTHDC1Q96MU7 727 aaKnown RBP-0.02□□□□□ -2.41
TRAJ28-201ENST00000390509 GNRHR2Q96P88 292 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms