RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 CEP170P1Q96L14 293 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 DNMT1P26358 1616 aaKnown RBP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 INTS8Q75QN2 995 aaKnown RBP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 KDM2BQ8NHM5 1336 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 LONRF3Q496Y0 759 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 ZNF449Q6P9G9 518 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 FAM149B1Q96BN6 582 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 EAF2Q96CJ1 260 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 A6NJR5 290 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 CTAGE3PQ8IX95 158 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 GPR101Q96P66 508 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 SPON1Q9HCB6 807 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 RNF8O76064 485 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 PIGBQ92521 554 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 SLC8A2Q9UPR5 921 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 FANCCQ00597 558 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
LRRK1-201ENST00000388948 ANAPC5Q9UJX4 755 aa16.32■□□□□ 0.2
LRRK1-201ENST00000388948 ADD1P35611 737 aaKnown RBP16.31■□□□□ 0.2
LRRK1-201ENST00000388948 CCDC121Q6ZUS5 278 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 NOSTRINQ8IVI9 506 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 MAIP1Q8WWC4 291 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 PRIMPOLQ96LW4 560 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 PSMD6Q15008 389 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
LRRK1-201ENST00000388948 RPS6KA1Q15418 735 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 GBP6Q6ZN66 633 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 GJA10Q969M2 543 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 KMT5AQ9NQR1 393 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 SERTAD1Q9UHV2 236 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 TCOF1Q13428 1488 aaKnown RBP16.31■□□□□ 0.2
LRRK1-201ENST00000388948 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
LRRK1-201ENST00000388948 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 ANXA13P27216 316 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 A0A0D9SFI3 127 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 HPDP32754 393 aaPredicted RBP16.31■□□□□ 0.2
LRRK1-201ENST00000388948 KLHL7Q8IXQ5 586 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 TRMT44Q8IYL2 757 aaKnown RBP16.31■□□□□ 0.2
LRRK1-201ENST00000388948 C7orf31Q8N865 590 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 NLRP12P59046 1061 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 MTERF2Q49AM1 385 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
LRRK1-201ENST00000388948 DIXDC1Q155Q3 683 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 NOL3O60936 208 aaKnown RBP16.3■□□□□ 0.2
LRRK1-201ENST00000388948 UBE3CQ15386 1083 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 AOC3Q16853 763 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 PDXDC2PQ6P474 469 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 WRNIP1Q96S55 665 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 ADALQ6DHV7 355 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 KRT15P19012 456 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 TFAMQ00059 246 aaKnown RBP16.3■□□□□ 0.2
LRRK1-201ENST00000388948 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 ASNSP08243 561 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 OSTNP61366 133 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 VPS37BQ9H9H4 285 aa16.3■□□□□ 0.2
LRRK1-201ENST00000388948 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
LRRK1-201ENST00000388948 IPO11Q9UI26 975 aaKnown RBP16.3■□□□□ 0.2
LRRK1-201ENST00000388948 PNOCQ13519 176 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 CALCOCO1Q9P1Z2 691 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 GOLGA8CPA6NN73 597 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 PALM2Q8IXS6 379 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 IQCA1LA6NCM1 817 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 CIB2O75838 187 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 NLRP4Q96MN2 994 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 METP08581 1390 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 ERVV-1B6SEH8 477 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 SLC4A1P02730 911 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 SRGAP2CP0DJJ0 459 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 ZNF274Q96GC6 653 aaPredicted RBP16.29■□□□□ 0.2
LRRK1-201ENST00000388948 RSPH14Q9UHP6 348 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 AMFRQ9UKV5 643 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 I3L4J1 428 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 WDR46O15213 610 aaKnown RBP16.29■□□□□ 0.2
LRRK1-201ENST00000388948 GNAT1P11488 350 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 SAT1P21673 171 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
LRRK1-201ENST00000388948 SLC17A8Q8NDX2 589 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 CHMP6Q96FZ7 201 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
LRRK1-201ENST00000388948 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
LRRK1-201ENST00000388948 PRDM5Q9NQX1 630 aaPredicted RBP16.29■□□□□ 0.2
LRRK1-201ENST00000388948 ATP8B3O60423 1300 aa16.28■□□□□ 0.2
LRRK1-201ENST00000388948 PRPSAP1Q14558 356 aa16.28■□□□□ 0.2
LRRK1-201ENST00000388948 HHATQ5VTY9 493 aa16.28■□□□□ 0.2
LRRK1-201ENST00000388948 WDR11Q9BZH6 1224 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms