RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 SHROOM1Q2M3G4 852 aaPredicted RBP21.76■■□□□ 1.07
GMDS-201ENST00000380805 SLFN13Q68D06 897 aa21.76■■□□□ 1.07
GMDS-201ENST00000380805 KCTD1Q719H9 257 aa21.76■■□□□ 1.07
GMDS-201ENST00000380805 AGBL3Q8NEM8 1001 aa21.76■■□□□ 1.07
GMDS-201ENST00000380805 MTMR9Q96QG7 549 aa21.76■■□□□ 1.07
GMDS-201ENST00000380805 USP17L10C9JJH3 530 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 STAT6P42226 847 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 PRELPP51888 382 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 ATP2B2Q01814 1243 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 KARSQ15046 597 aaKnown RBP21.75■■□□□ 1.07
GMDS-201ENST00000380805 SPDYE2Q495Y8 402 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 JAKMIP3Q5VZ66 844 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 IGSF22Q8N9C0 903 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 FAM151AQ8WW52 585 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 CUL5Q93034 780 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 CSRNP1Q96S65 589 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 ZNF277Q9NRM2 450 aaPredicted RBP21.75■■□□□ 1.07
GMDS-201ENST00000380805 TMEM260Q9NX78 707 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 ZNRF3Q9ULT6 936 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 NFE2L3Q9Y4A8 694 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 CNTNAP1P78357 1384 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 UBA7P41226 1012 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 SLC1A4P43007 532 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 PPP4R3AQ6IN85 833 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 KBTBD4Q9NVX7 518 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 RMND1Q9NWS8 449 aa21.75■■□□□ 1.07
GMDS-201ENST00000380805 ZNF70Q9UC06 446 aaPredicted RBP21.75■■□□□ 1.07
GMDS-201ENST00000380805 PPP1R3GB7ZBB8 358 aa21.74■■□□□ 1.07
GMDS-201ENST00000380805 SLC16A2P36021 539 aa21.74■■□□□ 1.07
GMDS-201ENST00000380805 MRPL12P52815 198 aaKnown RBP21.74■■□□□ 1.07
GMDS-201ENST00000380805 UBASH3AP57075 661 aa21.74■■□□□ 1.07
GMDS-201ENST00000380805 CCZ1BP86790 482 aa21.74■■□□□ 1.07
GMDS-201ENST00000380805 CCZ1P86791 482 aaPredicted RBP21.74■■□□□ 1.07
GMDS-201ENST00000380805 DLGAP5Q15398 846 aa21.74■■□□□ 1.07
GMDS-201ENST00000380805 RBM26Q5T8P6 1007 aaKnown RBP21.74■■□□□ 1.07
GMDS-201ENST00000380805 FILIP1Q7Z7B0 1213 aa21.74■■□□□ 1.07
GMDS-201ENST00000380805 C17orf53Q8N3J3 647 aaPredicted RBP21.74■■□□□ 1.07
GMDS-201ENST00000380805 CCDC150Q8NCX0 1101 aa21.74■■□□□ 1.07
GMDS-201ENST00000380805 RAD17O75943 681 aa21.73■■□□□ 1.07
GMDS-201ENST00000380805 CD44P16070 742 aaKnown RBP21.73■■□□□ 1.07
GMDS-201ENST00000380805 CASP1P29466 404 aa21.73■■□□□ 1.07
GMDS-201ENST00000380805 FXR2P51116 673 aaKnown RBP eCLIP21.73■■□□□ 1.07
GMDS-201ENST00000380805 BTNL9Q6UXG8 535 aa21.73■■□□□ 1.07
GMDS-201ENST00000380805 OGFOD1Q8N543 542 aa21.73■■□□□ 1.07
GMDS-201ENST00000380805 DPF2Q92785 391 aa21.73■■□□□ 1.07
GMDS-201ENST00000380805 ZBED3Q96IU2 234 aaPredicted RBP21.73■■□□□ 1.07
GMDS-201ENST00000380805 TAOK3Q9H2K8 898 aa21.73■■□□□ 1.07
GMDS-201ENST00000380805 KCND1Q9NSA2 647 aa21.73■■□□□ 1.07
GMDS-201ENST00000380805 PP2D1A8MPX8 630 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 F5H6K3 240 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 GDF11O95390 407 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 SERPINC1P01008 464 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 CDC25AP30304 524 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 JAG1P78504 1218 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 KLRC3Q07444 240 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 RRP1BQ14684 758 aaKnown RBP21.72■■□□□ 1.07
GMDS-201ENST00000380805 KCNB1Q14721 858 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 QRICH1Q2TAL8 776 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 SPATA1Q5VX52 437 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 RRAGBQ5VZM2 374 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 SYNRGQ9UMZ2 1314 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 TBC1D12O60347 775 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 NDUFB10O96000 172 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 ARID5BQ14865 1188 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 ZNF658Q5TYW1 1059 aaPredicted RBP21.72■■□□□ 1.07
GMDS-201ENST00000380805 TMC6Q7Z403 805 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 POTEDQ86YR6 584 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 VSTM4Q8IW00 320 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 NIM1KQ8IY84 436 aa21.72■■□□□ 1.07
GMDS-201ENST00000380805 GH2P01242 217 aa21.71■■□□□ 1.07
GMDS-201ENST00000380805 RPN1P04843 607 aaKnown RBP21.71■■□□□ 1.07
GMDS-201ENST00000380805 MMP14P50281 582 aa21.71■■□□□ 1.07
GMDS-201ENST00000380805 CDC37Q16543 378 aaPredicted RBP21.71■■□□□ 1.07
GMDS-201ENST00000380805 CDKAL1Q5VV42 579 aa21.71■■□□□ 1.07
GMDS-201ENST00000380805 FAM83AQ86UY5 434 aa21.71■■□□□ 1.07
GMDS-201ENST00000380805 CABP7Q86V35 215 aa21.71■■□□□ 1.07
GMDS-201ENST00000380805 NAP1L4Q99733 375 aaKnown RBP21.71■■□□□ 1.07
GMDS-201ENST00000380805 PSTPIP2Q9H939 334 aa21.71■■□□□ 1.07
GMDS-201ENST00000380805 INTS13Q9NVM9 706 aa21.71■■□□□ 1.07
GMDS-201ENST00000380805 GCFC2P16383 781 aaKnown RBP21.7■■□□□ 1.06
GMDS-201ENST00000380805 KCNJ6P48051 423 aa21.7■■□□□ 1.06
GMDS-201ENST00000380805 MCTP2Q6DN12 878 aa21.7■■□□□ 1.06
GMDS-201ENST00000380805 TEX2Q8IWB9 1127 aa21.7■■□□□ 1.06
GMDS-201ENST00000380805 TRMT44Q8IYL2 757 aaKnown RBP21.7■■□□□ 1.06
GMDS-201ENST00000380805 STAMQ92783 540 aa21.7■■□□□ 1.06
GMDS-201ENST00000380805 NAP1L5Q96NT1 182 aaPredicted RBP21.7■■□□□ 1.06
GMDS-201ENST00000380805 MMTAG2Q9BU76 263 aaKnown RBP21.7■■□□□ 1.06
GMDS-201ENST00000380805 BLZF1Q9H2G9 400 aa21.7■■□□□ 1.06
GMDS-201ENST00000380805 LTBP3Q9NS15 1303 aa21.7■■□□□ 1.06
GMDS-201ENST00000380805 GRIN3BO60391 1043 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 PDIA5Q14554 519 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 CALCRLQ16602 461 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 ARMCX5Q6P1M9 558 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 LRRC15Q8TF66 581 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.69■■□□□ 1.062e-7■■■■■ 27.2
GMDS-201ENST00000380805 TCP10L2B9ZVM9 353 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 SLC37A4O43826 429 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 APTXQ7Z2E3 356 aaKnown RBP21.69■■□□□ 1.06
GMDS-201ENST00000380805 PGAP2Q9UHJ9 254 aa21.69■■□□□ 1.06
GMDS-201ENST00000380805 RWDD2AQ9UIY3 292 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms