RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TCHPQ9BT92 498 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 PPANQ9NQ55 473 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 FOXN1O15353 648 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 CTNNA1P35221 906 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 GUCY2DQ02846 1103 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 ARL6IP4Q66PJ3 421 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 OXER1Q8TDS5 423 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 ADAM21Q9UKJ8 722 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 AK9Q5TCS8 1911 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 EHHADHQ08426 723 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 PTPROQ16827 1216 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 CCDC170Q8IYT3 715 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 LARP4BQ92615 738 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 PSTPIP2Q9H939 334 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 RRP15Q9Y3B9 282 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 FRMPD2Q68DX3 1309 aaPredicted RBP14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 KCNJ6P48051 423 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 CCT5P48643 541 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 LRRC47Q8N1G4 583 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 KCNB2Q92953 911 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 ISCA1Q9BUE6 129 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 EPC1Q9H2F5 836 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 HOMER2Q9NSB8 354 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 NKIRAS1Q9NYS0 192 aa14.04□□□□□ -0.16
DNMT3A-204ENST00000380756 ZNF804BA4D1E1 1349 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 ALX1Q15699 326 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 U2AF1L4Q8WU68 220 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 FUCA2Q9BTY2 467 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 SYNCQ9H7C4 482 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 AMFRQ9UKV5 643 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 ADGRG1Q9Y653 693 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 KRIT1O00522 736 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 TEX33O43247 280 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 CTIFO43310 598 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 H2AFZP0C0S5 128 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 LIG3P49916 1009 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 ADAM9Q13443 819 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 MAN2A1Q16706 1144 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 USH1GQ495M9 461 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 H2AFVQ71UI9 128 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 METTL16Q86W50 562 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 IQCGQ9H095 443 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 ZCCHC17Q9NP64 241 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 STK24Q9Y6E0 443 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 PPFIA4O75335 1185 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 GYS2P54840 703 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 CCDC6Q16204 474 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 CROCCP2Q86T23 111 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 JRKLQ9Y4A0 524 aa14.03□□□□□ -0.16
DNMT3A-204ENST00000380756 ZBTB16Q05516 673 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 WDR78Q5VTH9 848 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 TMTC3Q6ZXV5 915 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 CNKSR2Q8WXI2 1034 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 THAP9Q9H5L6 903 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 VEZTQ9HBM0 779 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 CEMIPQ8WUJ3 1361 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 CTDNEP1O95476 244 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 ABCB4P21439 1286 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 FKBP3Q00688 224 aaKnown RBP14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 ARHGAP44Q17R89 818 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 KCTD16Q68DU8 428 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 RAB17Q9H0T7 212 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 DISC1Q9NRI5 854 aa14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.02□□□□□ -0.16
DNMT3A-204ENST00000380756 TADA3O75528 432 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 GTF2IP78347 998 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 WDR24Q96S15 920 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 MTA3Q9BTC8 594 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 NHEJ1Q9H9Q4 299 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 FDPSP14324 419 aaKnown RBP14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 PLCG1P19174 1290 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 CXCR5P32302 372 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 BTDP43251 543 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 CUL4BQ13620 913 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 SUSD4Q5VX71 490 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 MB21D1Q8N884 522 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 ENGASEQ8NFI3 743 aa14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 DDX25Q9UHL0 483 aaKnown RBP14.02□□□□□ -0.17
DNMT3A-204ENST00000380756 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 BCRP11274 1271 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 ATP5DP30049 168 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 EPHB4P54760 987 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 IRX3P78415 501 aaPredicted RBP14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 SETDB1Q15047 1291 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 MAEAQ7L5Y9 396 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 TBCKQ8TEA7 893 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 KIFAP3Q92845 792 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 ABHD10Q9NUJ1 306 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 ASIC3Q9UHC3 531 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 PIK3C2BO00750 1634 aa14.01□□□□□ -0.17
DNMT3A-204ENST00000380756 KRT5P13647 590 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms